Apium graveolens (celery): 141720584
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Entry
141720584 CDS
T11340
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03440
Homologous recombination
agrv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141720584
03460 Fanconi anemia pathway
141720584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141720584
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141720584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
DUF6429
Motif
Other DBs
NCBI-GeneID:
141720584
NCBI-ProteinID:
XP_074379175
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All DBs
Position
4:208228060..208237693
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AA seq
675 aa
AA seq
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MEIQRRCVCGENEQLGDYLLKKRQEIVDSPKGISDNLDMTLQKAYSSICNSKTHITNLKD
LSKIKGVGKWILRLVQGFFDTASENEDLTRKGKENKGTRRYMPQKNSVAYALLVTLYRGI
ATGVDYMRKSELIDAAEASGLSRAPIMPEKGKGKPRQFGSSPREWYSGWSCMKTLVTKGL
VIKSSCPAKYMLTEEGKKAARECLSRSGLATSSDTVERSLDFDESNLTDKEFPHTDSVKE
SRLNHVSIEHKKSAEVPPESLNRFLSMGYSKEQILLAFSNVQKSSPNKNMSSLWPAVLCH
LREAEVYGSSSDFQNNPRCDPRPRPLPTNSYTRDVEISTHVDKNRTGSGSEGEICISKSE
FQPKPKFHTVSSQIDLSMKACSTTDNQVLKQHRDGRQFESNVLTVPPLSFGETFKDAYDV
ILILDDREKFTTQGSKTRKIVENISKEFNIEIEIRRLPVGDAIWVARHKQFRSEYVLDLI
VERKRVDDLRSSIRDNRYRDQKVRLLRCGLKKLIYVVEGDVNFSEAAESLKTACFTTEIL
EGFDVQRTTGLGDTLRKYGFLTQAIIQYYSLLNGKDKHDSPDVCPPYSEFVKKCEDLDKI
TVSDVFAIQLMQVPQVTEEVAMAVLELYPTVLSLVRAYSAIDGNIYAQEEMLKKQSNGKV
NGSASKNIFQLIWGN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagattcaaagacgatgtgtgtgtggtgaaaatgagcaactgggtgattatttgttg
aagaaaaggcaagaaattgtggattctccaaaagggatttcagataatcttgatatgact
ctgcagaaagcttattctagtatttgtaactccaagacccatatcaccaatctcaaagat
ttgtcgaaaattaagggtgttggcaaatggatattgaggctcgtgcaaggctttttcgat
actgcttctgaaaatgaagatttgacaaggaaaggaaaggagaataagggaactaggcgc
tacatgcctcaaaaaaattcagtggcctatgctttgttagtcacactttacaggggaatc
gctactggtgttgattatatgcgtaaatcggagctaattgatgctgcagaagcaagcgga
ctgtctcgtgctccaatcatgccggaaaaggggaaagggaaacctagacaatttggaagc
tcccctagggagtggtacagtggatggagctgcatgaagacattggttacgaaagggcta
gtcatcaaatcaagctgccccgcaaagtatatgctgactgaagaaggcaaaaaagcagca
cgtgaatgtctttcaagatcagggttggccacaagttctgatactgtggaaagatctttg
gattttgatgaaagcaatctgacggataaggagtttcctcacactgattcagttaaagaa
agtaggttaaatcatgtatcaattgagcacaagaaatcagctgaagttccacctgaatct
cttaataggtttttgagcatggggtatagcaaagaacagattcttcttgcattttcgaat
gtccagaaatcatcaccaaacaagaacatgtcttccctctggccagctgttttatgtcac
cttagagaagctgaggtgtatggttcaagttcggattttcaaaataatccgaggtgtgat
cctcgacctcgtccattgccaactaattcttatactagagacgttgaaatcagtactcat
gtagacaagaatagaacaggttctggtagtgagggagaaatctgtatttccaagtcagaa
tttcagccgaagccaaaatttcacaccgtctcttcgcaaatagacttatcgatgaaggct
tgctcaacaactgataaccaagtgcttaagcagcacagagatgggcggcaatttgaatca
aatgttttaacagttccacctttgtccttcggagaaacatttaaggatgcatacgatgta
attctgatattggatgatcgtgagaaattcaccacgcaagggtctaaaactagaaaaatt
gttgagaacatttcgaaagaattcaatattgaaatagagattagaaggcttccagttggg
gatgccatctgggtagcgcgccataaacaatttcgttctgagtatgttctcgatcttata
gttgagcggaaaagagttgatgacttacgaagctcaatcagggacaaccgctatagagat
caaaaagtgcggcttttgagatgcggactcaagaagctgatctatgtagtcgaaggtgat
gtaaatttttcggaagctgctgaaagcttaaaaacagcttgttttaccacagagattttg
gagggatttgatgtacagagaacgactggcttgggagatactctcaggaaatatggtttt
ttaacccaggcaataattcagtactacagtcttttgaatggcaaggacaaacatgatagc
cccgacgtctgtcctccttatagtgagtttgttaagaagtgtgaagatttggataagatt
acagttagtgatgtattcgccatacaactcatgcaggtccctcaggtgacagaggaggtt
gccatggcagttctagaattatacccaaccgttctttcccttgttcgtgcatactctgca
attgatggaaacatttatgctcaagaagagatgcttaagaagcagagcaacggcaaagtc
aatggatccgcaagcaaaaatatcttccagctaatttgggggaattga
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