Apium graveolens (celery): 141720705
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Entry
141720705 CDS
T11340
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141720705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141720705
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
141720705
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
141720705
NCBI-ProteinID:
XP_074379381
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Position
4:237412811..237417875
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AA seq
200 aa
AA seq
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MVTSPVVNTYPLASYTFGVKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILMVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATSPGIQPEWQIGECVATWW
RPNFETVMYPYCPPHIAKPKECKKIFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFSMMQA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgacatctccggtagtaaacacataccctctcgccagctacactttcggcgtcaaa
gagcccaaaatggagaaagacacctccgtcgccgatcgtttagctcgtatgaaagtcaat
tatatgaaggagggcatgaggactagtgtcgaaggaatattaatggtacaagaacataat
catccacatatacttctgctgcaaattgggaacactttctgcaagcttcctggtggacgt
ctaaagccaggagagaatgaaattgaaggcttaaaaagaaagctttccagcaaactcgct
gctacttcacctggtatccaacctgaatggcagataggtgaatgtgtggctacatggtgg
aggccaaactttgagacagtgatgtacccatactgccctccccacatagcaaaacccaag
gaatgtaagaagatttttcttgttcatctgtctgagagagagtactttgcagtgccaaaa
aatttaaaacttcttgctgttcccttgtttgaactctatgataatgttcagagatatggg
cctgtcatttccaccattccgcagcagttgtcaagattccagtttagcatgatgcaggca
taa
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