Apium graveolens (celery): 141720713
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Entry
141720713 CDS
T11340
Name
(RefSeq) cleavage stimulating factor 64 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141720713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141720713
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
141720713
U7-dependent histone pre-mRNA processing factors
141720713
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
partial_CstF
Motif
Other DBs
NCBI-GeneID:
141720713
NCBI-ProteinID:
XP_074379405
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Position
4:complement(238132896..238144398)
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AA seq
533 aa
AA seq
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MATSQHRCVFVGNIPYDATEEQLIRICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
ALSARRNLQSYEINGRQLRVDFAENDKNMDKSREQGHGGPGMNTNIGDTQKQVGAQAPRP
GSGLHQPIGLPVAIAAANVMAGALGGAQIATKQTQTGLENQPGFGSDPLTMHLSKMSRNQ
LIDIISELKVLATENKEQARQLLLVTPLLPKAIFQAQLMLGVVTPQMLQMPNIRQASFSS
GQSQQSGVQTLPSFPPLVQNNLHSDLMLKSQEGAVPAGLPNPLVQINYTLPSTQPRVQLP
ISSQSNYQQQGPAPVLPGASTVIPVNSQNVMKMSVRPQIQVAPSPYAKQQAQPYLFQHPS
QAAPAKLGNNNQLVLPQGPREPFLQSSSLNVGRNPNYTSAEYDRPPQLHNNSDRDNYQHL
PRGLSEKATMIYDDQDTVHRPSKLLKMNDGRSTSVSANVNMSTSVAGPSQVSGMSHPKTE
EASTSEKQTSQLPPELESALLQQVLSLTPEQLSSLPPDQQQQVIQLQQMLRLS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcgcagcatcgatgtgtattcgttgggaatataccgtatgatgctactgaa
gaacaacttattcgtatatgtgaggaggttggtcctgttgtttcattcagattagttatt
gatagagaaactgggaagccaaaaggttatggcttctgtgaatacaaggatgaagagaca
gctttaagtgcccgccgaaatcttcagagttatgagatcaatggcaggcaattacgagtt
gattttgctgaaaacgataagaatatggataaaagccgagagcagggtcatggtggacct
ggaatgaatacaaatataggcgatactcaaaagcaagttggggcccaagcaccgcggcca
ggttctggtctccaccagccaattggtcttccagtagctattgctgctgcaaacgtcatg
gctggagcccttggtggagctcagattgcaaccaagcagactcaaaccggattggaaaat
cagccaggatttggtagtgatcctttgaccatgcacctgtccaaaatgtcaagaaaccag
ctaattgacatcatatccgagctgaaggtactagctacagaaaacaaggaacaagcacgt
caactactacttgtaaccccattgttgcctaaagcaatcttccaggcgcagttgatgcta
ggagttgtaaccccacaaatgttgcaaatgccaaatattcgtcaagcttctttttcatct
ggacaaagtcagcagtcaggagtccaaactcttcctagcttccctcctcttgtacagaat
aacctgcattctgatttgatgctcaagtcacaagaaggtgcagtccctgctggacttcca
aatccactggttcaaataaattatactctcccctcaacacagcctcgagttcagcttcca
atctcaagccagagcaattatcagcaacaaggtcccgcaccagtgttacctggagcatca
acagttataccagttaactcccagaatgtaatgaagatgtctgtaaggccacagatacag
gtggcaccttccccttatgcaaaacagcaagcgcaaccttatttgtttcaacatccaagc
caggctgcgcctgcaaaattggggaataataatcagttggtacttcctcaaggaccccgt
gagccatttttgcagtctagctccttgaacgtgggccgcaatccaaattacacaagtgca
gaatatgatagacctccccaacttcacaacaattcggatagggacaactatcagcattta
cctcgagggttatcggaaaaggcgaccatgatctatgatgatcaagatacagtccaccgt
ccttcaaaactcttaaaaatgaatgatggaaggtctacctccgtttctgcaaatgtcaat
atgtcgacttctgtagctgggccatctcaagtttctggaatgagccatcctaaaacagaa
gaagcctcgacttctgaaaaacaaacttctcagctacccccagagttggagtctgcctta
ctgcaacaagtgttaagtctgacaccagagcagctaagttctttgccaccagatcaacag
caacaagtcattcagctccaacagatgctgcggcttagctga
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