Apium graveolens (celery): 141720844
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Entry
141720844 CDS
T11340
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
agrv Apium graveolens (celery)
Pathway
agrv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141720844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agrv04131
]
141720844
Membrane trafficking [BR:
agrv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
141720844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
141720844
NCBI-ProteinID:
XP_074379584
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All DBs
Position
4:complement(255876076..255885438)
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AA seq
792 aa
AA seq
DB search
MISGGGGFEDEEKWLAEGIAAIQHNAFYMHRALDSNNLKEALKFSALLLSELRTSRLSPH
KYYQLYMRAFDELRKLEVFFKEEDRHGCSVVDLYELVQHAGNILPRLYLLCTVGSVYIKS
KDVSAKDVLKDLVEMCRAIQHPIRGLFLRSYLSQVSRDKLADIGSQSEGDEDTVMDAVEF
VLQNFAEMNKLWVRMHYQGPVRIREKMEKERSELCDLVGKNLHVLSQIEAVDLEMYRDTV
LPRVLEQVINCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGAFPQLQATVDIKTVLSRL
MDRLSNYASSSPEVLTDFLQVEAFTKLSGAIEKVIEAQADMPIVGVITLYVALLAFSLRV
HPERLDYVDQVLGACVKTLSGKPKLEDSRATKQVVALLSAPLEKYNDIATALTLSNYPRV
MDHLDSSTNKIMAMVIIQSIMKNNTCVSTADKVDVLFKLIKGLIKDLDETSMDELDEEDF
KEEQNSVARLIHMLYNEDPEEMLKIIVTVKNHIMTGGPKRLPYTVPPLVFSALKLVRKLQ
VQDGDVTSEEIPATPKNIFQLLNQIIETLSSVPSPELALRLYLHCAEAASDCEIEPLAYE
LFTQAFVLYEEEVADSKEQVTAIHLIIGTLQRINVFGVENRDTLTHKATGYSAKLLKKPD
QCRAVYACSHLFWVDNQDGIKDGERVLLCLKRSLRIANAAQQMANATRGSSGPVTLFVEI
LNKYLYFFEKGNQHITSAAIQDLVELIKTEMQSDTTTADPATNAYFSSTLRYIQFQKQKG
GLMGEKFDAVKV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgataagtggaggaggaggtttcgaagacgaagagaaatggcttgctgaaggcattgct
gccattcaacacaacgccttttatatgcatcgcgccttggactctaataatctcaaagaa
gcactcaaattctctgctctcttgttatcggagcttcgaacttccagactttcgcctcac
aaatactaccaattgtatatgcgtgcttttgatgaattacgaaagctggaagtgtttttt
aaagaggaagatcgccatggttgttctgttgttgacttgtatgaacttgttcaacatgct
ggaaatattttacctagactgtatttgctatgtaccgtaggatccgtttacatcaagtca
aaggatgtttctgctaaagatgttcttaaagatctcgtggagatgtgtcgtgctattcag
catcccatacgcggtctctttttaaggagttacctttctcaagttagtagagataagttg
gcagatattggttctcagtctgaaggtgatgaagacaccgtcatggatgctgtagagttt
gtgctacagaactttgctgagatgaataagctctgggtccggatgcactatcagggacct
gtcaggataagagagaagatggagaaagaaaggagcgagctttgtgatctcgtcggaaaa
aatttgcatgttcttagccagatagaggctgtcgatcttgaaatgtatagagacaccgtc
cttccaagagttttggagcaggttataaactgcaaggatgagcttgcacagtattatcta
atggactgcataattcaagtatttcctgatgagtaccacttgcagactctcgagacatta
ttgggtgctttcccgcaacttcaggcaacggttgatatcaagacagtcttatcacgatta
atggacagactgtccaactatgcatcgtcaagtcctgaggtactgacagactttctgcaa
gttgaggcatttactaaattaagtggggccatcgaaaaggtgatagaagcacaagctgac
atgcctattgttggagtcatcactttgtacgttgctctccttgcttttagcctacgtgtt
catcctgagcgactcgattacgtggatcaagtgctgggagcctgcgtcaaaacactttca
ggaaaaccaaagcttgaagatagcagagcaacaaaacaagttgttgctcttttaagtgct
ccgttagagaaatacaatgatatcgccacagctttgacactttctaattatcctcgcgtt
atggaccacctcgacagtagcacaaataaaataatggctatggttattattcaaagcata
atgaaaaataacacatgtgtttccactgctgacaaggttgatgtattgtttaagttaata
aaaggacttataaaggatctagatgaaacctctatggatgagctggatgaggaagatttt
aaggaggaacaaaattctgttgcccgtctaatacatatgttgtacaatgaagatcctgaa
gagatgctaaagattatagttactgtgaagaaccatattatgactggaggaccaaagcgt
ctgccgtatacagttcctcctcttgtcttttctgctttgaagttggtgaggaaattgcaa
gttcaggacggagatgtgactagtgaagaaattcctgctactccaaagaatatttttcag
ctcttaaaccagattattgaaacactttcttctgttccatcacctgagctggcactgagg
ttgtacttgcattgtgccgaggctgccagtgactgcgaaatcgagccacttgcttatgaa
cttttcactcaggcatttgttttatatgaggaagaagttgcggactcgaaagagcaggtg
actgctatacacctaataattgggaccttacagaggataaatgtatttggcgtcgaaaat
agggataccctaacccacaaggccacagggtattcagcaaaactactaaaaaaacctgac
cagtgtagagcagtatatgcatgttcacatctcttttgggttgacaatcaggatggaatt
aaggatggagaaagggtactcctttgtctcaagcgttcattaaggattgcaaatgctgca
cagcagatggcaaatgctacacggggcagcagtgggcctgtgactctgtttgttgaaatc
ttgaacaagtacctttacttttttgagaaggggaatcaacatataacaagtgctgcaatt
caagatcttgtagaactaataaagactgagatgcaaagtgacacaactactgctgatcca
gcgacaaatgcttatttttccagcacattgcgttatattcaatttcagaaacagaaaggt
ggtttgatgggtgagaaatttgatgctgtcaaagtatga
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