Apium graveolens (celery): 141720878
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Entry
141720878 CDS
T11340
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
agrv Apium graveolens (celery)
Pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141720878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141720878
03041 Spliceosome [BR:
agrv03041
]
141720878
03032 DNA replication proteins [BR:
agrv03032
]
141720878
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
141720878
Spliceosome [BR:
agrv03041
]
Complex A
U1 snRNP components
Sm proteins
141720878
U2 snRNP components
141720878
Complex B
U1 snRNP components
141720878
U4/U6.U5 tri-snRNP components
141720878
Complex C
U2 snRNP components
141720878
DNA replication proteins [BR:
agrv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
141720878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
141720878
NCBI-ProteinID:
XP_074379631
LinkDB
All DBs
Position
4:complement(259631107..259634644)
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSIGVSRGRAAGMRARAPAGGRGG
PPGRGAAPPLRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagtctaggaataccggtgaagcttcttcacgaagcagcgggtcacatcgtg
accgttgaactcaagagcggcgagctttacaggggcagcatgatcgaatgcgaagacaat
tggaattgtcagctcgaaaacatcacttttactgccaaggatggcaaggtgtcacaactt
gaacatgttttcatccgaggtagcaaagtcaggttcatggttatcccggatatgctaaag
aatgcaccaatgttcaagcgacttgaagctagaatcaagggcaagggttcttcgattgga
gttagtaggggccgtgctgcaggaatgcgagctagagcacctgctggtggtcgaggaggt
cctcctggtaggggtgcagcacccccactacgtaggtaa
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