Apium graveolens (celery): 141721079
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Entry
141721079 CDS
T11340
Name
(RefSeq) protein PAT1 homolog 2-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
agrv Apium graveolens (celery)
Pathway
agrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141721079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141721079
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141721079
mRNA degradation factors
5'-3' decay
Decapping complex
141721079
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
141721079
NCBI-ProteinID:
XP_074379922
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Position
4:complement(281367861..281373940)
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AA seq
814 aa
AA seq
DB search
MDRSDSHDLKEISPCFASDAALFDASQYAFFGQGGVEGAVLGGLEDEANDASVLGVGKDE
YHLFDAEEESGIGSLSDVDDLATTFSKINRVVTGPRHPGVIGDRGSSSFSRESSSAAEWS
KELDFPDWLDQQISDTESCQESKRWSSQPHLSPVHVPESKSIYRTSSYPLQQHQQQFPNE
INLESKSAFTSYPPPGSISQFSSPHQHSRRLNLSSLGSGSQLPFSAPDLSPLSNSDIHMA
SIPHGYRYSRNIPHVVSPGISLGSGSHNRWHNHAGLLLGDQSSVLNNILQQQFLQPDNLV
SPHLMSQQQQLQHHRLHLPIQPSLSHYSSLQSHLYNVLPSPPSHLRKHKSADMRDHRPRV
SQRGKQAWLSQQSSDASLQSDDNRPQFRSKYMTADEIESILKIQHAATQNGDPYIDDYYH
QARLAKESTESRTKLRFCPAHLKEPSSRSRNNSDSQPHLKVDSHGRVSFSSIRRPHSLLE
VDPPSSASGEVSAEQKMSERPLEQEPMLAARITIEDGLRVLFDVEDIDRFLQFSQPQDGG
TQLRRRRQILLEGLAASVQLVDPLGRSGTSVGLNPKNDVVFLWLVSLPKGRKFISRYLQL
LFPGGELARIVCMTIFRHLRFLYGGLPSDPEAAETITNLAKMVTECVDGMDLNSLSACIA
AVVCSSEQPPLRPLGSSAGDGASIMLIRVLERATQLFTHPQASSSRVPPNPSLWQASFDA
FFGLLTKYCLGKYDRIMQSIYAQNPQPSPDIITQEAARAINREMPVEVLRASLPHTNDRQ
RKLLLDFSKRSMPVSGISAHSGSSGHVAPEFVRG
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggacagatctgattctcatgatttgaaggagatttctccatgttttgcttcagatgct
gcactttttgatgcatcacaatatgcattctttggacaaggtggagtggaaggggctgtg
ttgggaggactggaagatgaggcaaacgatgcttctgtacttggtgttggcaaagatgaa
tatcatttgtttgatgcggaagaggaatcaggtataggatctctctctgatgtggatgac
ctggcaactacattctcaaagataaacagagttgtcactggaccaagacatcctggagta
attggtgatcgcggatctagttctttttcaagggaaagttcttctgctgcagaatggtca
aaggagttggattttcctgactggttagatcagcagatatctgacacagagagctgccag
gaaagcaaaagatggtcttcccaaccacatctctctcctgtccatgttccagagtcaaaa
tctatatacaggacatcttcgtacccgctacagcaacatcaacaacaatttcctaatgaa
attaacttagaatcaaagtcagctttcacttcataccctcctccaggtagcatatctcaa
ttttcttcacctcaccaacattcgcgacgcctgaatctgtcatctctgggaagtgggtca
cagttacctttctctgcaccagacctctctcctttgtccaactctgatattcatatggct
agcattccacatgggtaccgttatagtcgaaatattcctcatgttgtctcacctggtatt
tctctcggtagtgggtcacataatcgttggcacaaccatgcagggttacttctcggggat
cagtccagtgtcttaaataacattctgcaacagcaatttctgcagccagataatctggtt
tccccgcatttaatgtcacaacagcagcaactgcaacatcataggcttcatcttcctatt
caaccatctttatcacattattcatctctgcaatcccatttatataatgtccttccttct
ccaccctcacatctaagaaaacataaatcagctgatatgcgggatcatcgacctagggtt
tcacaaagaggtaaacaggcatggttatctcaacaaagttctgatgctagtctgcaaagt
gatgataatcggccacaatttagatccaaatatatgactgctgatgaaatagaaagtatt
cttaaaatacagcatgctgcaacacagaacggcgacccttatatagatgattattaccac
caagctcgccttgcaaaagaatctactgaatcaaggacaaaacttcgcttctgcccagct
catcttaaggagccctcttctcgatcacgtaacaattcagactcccagcctcatctcaag
gttgattctcatggaagggtttcattctcctctattcgtaggcctcattctctccttgaa
gtcgaccctccttcctctgcttctggggaggtaagtgctgaacagaaaatgtctgagagg
cccttagaacaggaacccatgctggctgcaagaataacaattgaggatggccttcgcgtc
ctctttgatgttgaggacatcgatcggtttctacaatttagtcagccccaagatggtggg
actcagctgaggcggaggcgacagatcctcttagaaggcttagcagcatcagttcagctt
gttgacccacttggaaggagcggaacatcagttgggctaaatcccaaaaatgacgttgtg
ttcctgtggctcgtttctcttcccaaaggccgaaagtttatttcaagatacctccagctt
ctttttcctggtggtgagctggcccgaatagtttgcatgaccatcttccgtcacttgagg
ttcttatatggtggccttccttctgatccagaagcagccgaaactatcaccaatcttgca
aagatggttactgaatgtgttgatggcatggaccttaattctctgagtgcatgcattgct
gcagtggtttgttcttctgagcagccaccccttcgtccacttggcagttctgctggagat
ggagcatcgattatgttaatacgtgtcttggagagggcgactcagctgtttacccatccg
caggcctctagcagccgtgttccgccaaatccttccctgtggcaggcttcattcgatgcc
ttttttggtcttcttactaagtattgtctgggtaaatatgacagaataatgcagtcaatc
tatgcacaaaacccccaacctagcccggatatcattactcaagaggcagcaagagctata
aacagagaaatgcctgtagaagttctacgtgctagtctgccccacacaaatgatcgtcag
aggaagttactacttgatttttccaagcggtctatgcctgtaagtggaattagtgctcat
agtgggagcagcggtcacgtagctccagaatttgtcaggggttag
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