Apium graveolens (celery): 141721431
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Entry
141721431 CDS
T11340
Name
(RefSeq) THO complex subunit 4D
KO
K12881
THO complex subunit 4
Organism
agrv Apium graveolens (celery)
Pathway
agrv03013
Nucleocytoplasmic transport
agrv03015
mRNA surveillance pathway
agrv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141721431
09122 Translation
03013 Nucleocytoplasmic transport
141721431
03015 mRNA surveillance pathway
141721431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141721431
03041 Spliceosome [BR:
agrv03041
]
141721431
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141721431
TREX complex
141721431
Spliceosome [BR:
agrv03041
]
Complex C
Other components
EJC/TREX
141721431
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141721431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_11
RRM_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
141721431
NCBI-ProteinID:
XP_074380458
LinkDB
All DBs
Position
4
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AA seq
298 aa
AA seq
DB search
MASLDVSLDDMIKSRRTAAKGRGQGRAQRGRGGGSLNGGRMNGKPNRGGRFLRVNTTAAP
SAFNIAKSSRRARGLPWQRDLLEDSLRSVGLPAIDSEAKLFVSNLDSGVSNQDIRELFSE
IGELKRYAIHYDKNGRPSGSAEVVFTRRSDAFQALKKYNNVQLDGKPMKIEITGASSDFP
VLARGNVVGVVNGKRTVVMKPGMIRGRGFNSFGRNNAQRSRRGVIANGRGGMMNGRGGGG
RGNTTGRGGMIGRGSRGRGNTSSRGGRGGGRGGKKNVDKSADQLDKELESYHAEAMQT
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttggatgtgtcactagatgatatgatcaaaagcagacgtactgctgcgaaa
ggtagaggacaaggcagggcccaacgaggccgcggaggtggctcattaaatggtggaaga
atgaatggaaagcctaatagaggtggtcgtttcttgagggtgaatactacagctgcccca
tcggcttttaacattgccaagtcaagtcgtagagccaggggtttgccatggcagcgggac
ttgctcgaagacagcctgcgttctgttggtttaccagccattgatagtgaagcaaaattg
tttgtttccaacttggatagtggagtttcaaatcaagatataagggaacttttctctgag
atcggggagctgaagcgatatgccattcattatgacaaaaatggccgaccaagtggttca
gctgaagtggtgtttacccgtagaagtgatgcatttcaagccttgaagaagtataacaat
gttcagttggacggaaagcctatgaagattgaaataactggagctagttcagatttcccg
gttttggctcgtggtaatgttgtcggcgttgtgaatgggaagaggactgttgtgatgaag
cctggaatgattcgtggaaggggcttcaattcttttggtcgtaataatgctcaacgaagc
cgtagaggtgtaatagctaatggcaggggtggcatgatgaatggtcgtggtggtggtggt
cgggggaataccactggcaggggaggtatgattggtcgtggtagccgaggtcgtggcaat
acaagtagcaggggtggtcgtggtggtggacgtgggggtaaaaaaaatgtggacaagtct
gctgatcagcttgacaaagaactggagagctaccatgcagaagcaatgcaaacttaa
DBGET
integrated database retrieval system