Apium graveolens (celery): 141723756
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Entry
141723756 CDS
T11340
Name
(RefSeq) putative pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv00040
Pentose and glucuronate interconversions
agrv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141723756
Enzymes [BR:
agrv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
141723756
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141723756
NCBI-ProteinID:
XP_074381744
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Position
5:complement(29047557..29049646)
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AA seq
408 aa
AA seq
DB search
MPMATNIHLSLLFLFSLFLTFTLISSSPHQDPDLVVHEVHRDINASRRNLGFLSCGTGNP
IDDCWRCDPNWEKNRQRLADCSIGFGKNAIGGRDGKIYLVTDSSDDDAVTPKPGTLRHAV
IQDEPLWIIFQRDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINI
HDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCEDGLIDAIMGSTA
ITISNNFMTHHDKVMLLGHSDSYSQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTHWEMYAIGGSASPTINSQGNRFLAPDRRFSKEVTKHEDAPESEWKKWNWRTEGDLMLN
GAFFTPSGAGGSSSSYSRASSLGARPSTLVGQLTVASGSLNCKKGSRC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggcaactaacattcatctctctctcctctttctcttctctctcttcttaact
tttactctcatttcttcttccccacatcaagaccctgatttagtagtccatgaagtacat
agggatattaatgcttctaggaggaacttaggatttttatcatgcggaaccggtaatccc
atcgacgactgttggcgttgcgatcctaattgggaaaaaaaccgtcaacgtcttgcggac
tgctcaattggatttggaaaaaatgctattggaggaagagacggtaaaatttacttagtg
acggattccagtgacgacgatgctgtgaccccgaagccgggaactctgaggcatgcagtg
attcaagacgagccattatggattattttccaacgtgacatggtgatcaagttaaaagaa
gagctaataatgaattctttcaaaactattgatggcaggggagctagtgtacatattgct
ggtggtccatgtataactattcaatatgtaacaaatattattattcacggaataaatatt
cacgattgtaaacaaggtgggaacgctatggtacgaagctccccacggcacttcgggtgg
agaacgatatcggacggtgatggcgtgtcgattttcggaggcagccatgtgtgggttgat
cattgttctttgtctaattgtgaagatggcttgattgatgctatcatgggttccacggct
ataacgatttcgaataattttatgactcaccatgacaaggtgatgttgctaggacatagt
gattcttatagtcaagataagaacatgcaagttacaattgcttttaatcactttggtgaa
ggccttgtgcaaagaatgcctagatgtagacatggatatttccatgtggtgaataatgac
tacacccattgggaaatgtatgctattggtgggagtgcatcgcccacaattaacagccag
gggaacagatttcttgcaccagaccggagatttagcaaagaggttacgaagcatgaggat
gcaccggagagtgaatggaagaagtggaattggagaacggaaggtgatttgatgttgaat
ggtgcattttttactccatcaggtgctggaggatcttcttctagttactctagagcttcg
agcttaggagcaaggccatcgaccttggtaggtcagcttacagtagcctcaggttcactt
aactgcaagaaggggtcacgatgctaa
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