Apium graveolens (celery): 141724137
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Entry
141724137 CDS
T11340
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141724137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141724137
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
141724137
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GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
141724137
NCBI-ProteinID:
XP_074382243
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Position
5:67325291..67335096
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AA seq
213 aa
AA seq
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MVMSTAVNTYPLSSYTFGSKEAKIEKDTSVADRLARMKTNYVKEGMRTSVEGILLVQEHS
HPHILLLQIGNTFCKLPGGRLRPGENEIEGLKRKLSSKLAANASNLQPNWQIGECVATWW
RPNFETMMYPYCPPHISKPKECKRLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMINNETNDKLTNEQLLL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgtcgacggcagtaaacacatacccactatcaagctacacatttggtagtaaa
gaagccaagattgagaaagacacttctgttgctgatcgtcttgcccgtatgaaaaccaac
tatgtaaaggaaggaatgaggacttcggtcgaggggattttactggtacaagagcatagc
catccccatattcttcttctgcaaataggaaataccttctgtaaacttcctggcggtcgt
ttaaggcccggagaaaatgaaattgaagggctgaaaaggaagttatctagcaaattggct
gcaaacgcatctaatctacagcctaactggcagatcggagagtgtgtagctacctggtgg
aggccaaactttgaaactatgatgtacccatactgccctccacacatttcaaagccaaag
gagtgcaagaggctttacctagtccacttatcagaaagagagtactttgctgttccaaaa
aatttgaaactccttgccgttcccttgttcgagctgtatgataatgttcagagatatgga
cctgttatttctacaattccccaacagctttccagatttcagttcaacatgatcaacaat
gaaacaaatgacaaattgacaaatgagcagctgctgctttga
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