Apium graveolens (celery): 141724242
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Entry
141724242 CDS
T11340
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141724242
03012 Translation factors [BR:
agrv03012
]
141724242
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141724242
mRNA cycle factors
Stress granule specific factors
141724242
Translation factors [BR:
agrv03012
]
Eukaryotic type
Initiation factors
eIF-4
141724242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
DUF6763
Motif
Other DBs
NCBI-GeneID:
141724242
NCBI-ProteinID:
XP_074382400
LinkDB
All DBs
Position
5:complement(88043815..88054635)
Genome browser
AA seq
1758 aa
AA seq
DB search
MSGNQTRAGKTESVQYRKTGRSTGSGGHRNYAGARGRGGGVNAPPPSLSSNKSFKKPSNF
QGVQTWVSNGGVNLESSDNAALAANGAHSQLHGVDAQVDVKPAVVPSQKSTRGLPKAPAA
NVCAVSSSTLAPSTPVKGGDFTLQFGSISPGLMQVPARTSSAPPNLDEQKREQARFDSLR
AAPVLPTQSIPKQHVPTNKSVITNQSTAIDGHSVSKIRKDVQVVVGPQTIQTQKPSVHPV
TGMPMQIQYHQSHIPAQFGGPNTQLQSQSMVNSSMAIPMPMTMPFPMGNHPQVQQVYFQG
LPPHMLQPHGVMHHGQSANFTSQMGTQLPHLSNIGMNINPQFSQKQSVDFGNGRKTVKIT
HPHTHEELSLIKKANAFIETGSSAPQSQPSVPPQSQPVTTFPPGHPVNCYPNSFSQGSIF
LPGSLPLTSIHITPRLNDQGAVRPTANPNGEKNAESSFSMNLPIVETTIPNISSQGEATS
ILSQRDAENMKKRSLQQSKSTSVPVQSMATAGVSDFVSAASPVTQFQHLPSVVCGTTLGT
KSDLHNGSKSDDNDEKSHSLLLQNQQFTSGSPLSLENVENLNSPPLLEAAPAQVIVRESG
TTGAAIDLKTGSTEVQGTCELAKKDGANYVKVSADCPVPDKPQYDTVGIQERRKMLLDES
EENANRYVKSPKSILPRLSGNSDYIGSLVVDINNEQQKLEKEPRFPREVKADGDLSISTS
GAVDCLITETSSSSLGTRISHDGYKSSPSGASTNKDVAVGKTECSSTVAGMLDQKSLILS
VTSHSELPCATEVADSDSTELLSSSTDSKNKPVLETNISKNTISRGKKKRKEALQKADRA
GTTADLYMAYKGPDEKKEIITCVQSSETTSSHPKELSSGTSHEEAPNESIAEPDDWEDAV
DLSTQKLESSEDQKQFGEVKNHIEDESLMTRKYSRDFLLKFSEQCKDLPDGFEITSDITE
ALAVSIGNVPRDKLHGPGRNVDRSMERSRSGRRGSGMNDDEKWSKVPGLLPSGLDMGYGN
HGNNVVFQPRGNFGVLKNPRAQIPVMYSGVLSGPVQYMNQQYGIQRTNSDAESWQRTNSF
QRGLIPSPRTPSQVMHKAERKYEVGKITDEEQAKQRQLKSILNKLTPQNFERLFEQVKQV
NIDNAGTLTGVISQIFDKALMEPTFCEMYANFCYYLAGELPDFIEDDEKITFKRLLLNKC
QEEFERGEREEEEANREEGEGETKQSDEEREQKRVQARRRMLGNIRLIGELYKKKMLTER
IMHECIKKLLGQYQNPDEEDIEALCKLMSTIGEMIDHPKAKEHLDAYFDMMTKLSNNMKL
SSRVRFLLKDSIDLRKNRWQQRRKVEGPKKIEEVHRDAANERQAQANRLTRGLSMNSSFR
RGQQPMDFAPRGSNVLLSPNAQLSGFRGVPHTPRGYPTQDIRTDERHLLDNRIQSVQLTQ
RPLGSDSITLGPQGGLARGMSIKGQPSMSSIPFSDMHSSDFRRTTSGNGYGFVLDRPTYA
PREGIFPKIAPDRLASPAAPDHMNLKDGNQSYGNREVRNPDQVSNGSRPNTPQTRSKESS
SVQKVLPEEQLRKMSMETIKEFYSAKDEKEVALCVKDLNAPGFYPSMIYIWITDSFERKD
IERDLLAKLLINLAKSQDALLSKPQLVEGFELVLASLEDAITDAPKAPEFLGSIFAKVVL
ENVLPLAEIGRLIFEGGEEQGQLVDSGLAAKVIGRALEIVRIEKGETVLKEICTGSGLRR
ENFRPPNSKRVSSLDQFI
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaatcaaacgagagctggaaagaccgagtctgtgcaatatcgaaaaacaggc
cgatctactggctctggcggacacaggaattacgctggcgcccgtggccgaggcggtggg
gtcaatgcccctcctccttcactctcttctaataagagttttaaaaagccgagtaatttt
caaggtgtgcaaacttgggtttcgaatggtggtgtgaatttggagtctagtgataatgct
gctctggctgctaatggtgctcattcgcaattacatggagtcgatgcacaggttgatgtc
aagccagcagttgtgccgtcacagaaaagtaccaggggtctgccaaaggctccagcagcg
aatgtttgcgcggttagctccagtacgttggctccatcaacccctgtaaaaggtggagat
tttacgcttcagtttggatcaataagtcctggtttgatgcaggtacctgccagaactagc
tcagcacctccaaatctggatgaacagaaacgagaacaggctcgttttgattccttaaga
gctgcaccggtgctgccaacacaatctattcctaagcaacatgtgcctacaaacaagtct
gtaattactaaccaatctactgctattgatggtcactcggtgtccaaaataagaaaagat
gtgcaagttgttgttggtccacaaaccatccaaactcaaaagccttctgtacaccctgtt
actgggatgcctatgcaaatccaatatcaccagtcacacattccagctcaatttgggggt
cctaatacacaactgcagtctcaaagcatggtgaatagttctatggcaattcctatgccc
atgacaatgcccttccctatgggaaatcatccccaagtacaacaagtgtattttcaaggt
ctgccaccccatatgctgcaacctcatggtgtcatgcatcatggccagagtgcgaatttc
acatcacaaatgggtactcagttgcctcacttgagcaatatcgggatgaacatcaatcct
caattttcacaaaaacagtcggtagattttggtaatggacgtaaaactgttaagataact
catccgcatacacatgaagagttgagtttaattaaaaaggctaatgctttcatagaaaca
ggatcttcagctccgcaatcacaacccagtgtaccaccccaatcgcaacctgttacaact
tttccacctggtcatccagtaaactgctaccctaattctttcagtcagggttccatcttt
ttaccaggttctcttcctttgaccagtatccacatcactccaaggttaaatgatcagggt
gcagtgagaccaacggctaatccgaacggtgagaagaatgcagaatcttcattctcaatg
aacttgccaattgttgagacgactattcctaatatttctagccaaggagaagctacctca
atccttagtcaaagagatgctgaaaatatgaagaaaaggtcgttacagcagtcaaagtct
acatcagtacctgttcaaagtatggccactgctggagtctctgattttgtttctgcagcc
agccctgtaacccaatttcagcatctaccatcagtggtctgcggtacgactctaggcaca
aaatctgacttacataatgggtctaaatctgatgataacgatgaaaagagtcattcttta
ctactacagaatcagcagtttacatctggttcgcctttgtcactagaaaatgtggaaaac
ctaaattctcctcctttactggaagctgcgccagcacaggttattgtcagggaatcggga
acaactggggctgccattgatttgaaaacaggtagtactgaggtacagggaacttgtgag
ttggcaaaaaaagatggtgctaattatgttaaggtatctgctgactgccctgtgcctgat
aaaccacagtatgatactgttggaattcaagaaaggagaaaaatgcttcttgatgagtct
gaagaaaatgctaatagatatgtgaaaagtccaaaatctattttaccaagactatctgga
aattctgattatattggtagccttgttgtggacataaacaacgaacaacagaagttggag
aaggaacctagattccctagggaggtaaaagcagatggtgatttatcaatttctacttct
ggggcagtggactgcttgattactgaaacttcgtcgtcatctcttggaaccagaatctcg
catgatggttataagagttcgccttcaggtgcttctacaaataaagatgttgctgttggt
aaaacagaatgttcaagtacggtcgccggcatgttagatcagaagtcgctcattctttca
gtcacatctcattctgaactgccttgtgcaactgaagttgctgatagtgatagcacagag
ttgctttcttcatcaactgattccaagaataaacctgtgctggagacaaatatatctaag
aatacaatttcgagagggaagaaaaagagaaaagaagctttacaaaaagcagatcgtgct
ggtacaactgctgatctctatatggcatataagggtccggatgaaaagaaagagattatt
acatgtgttcagagctcagagactacgtccagccatcctaaagagttgtcttctggcacc
tcccatgaagaggcaccaaacgagagtatagctgaaccagatgattgggaggatgctgta
gatttatcaacacaaaaactggaaagttctgaagatcagaagcaatttggagaagtgaaa
aatcacattgaggatgaaagtttgatgaccagaaagtactccagagatttccttcttaaa
ttctctgaacaatgtaaggatcttcctgatggttttgagattacttcagatattacggaa
gcattggcggtgtccattggtaatgttcctcgtgataagttgcacggcccaggaagaaat
gttgataggtcgatggagagatctcgatcgggtcgccgtggtagtggcatgaatgatgat
gagaaatggagcaaggtacctgggcttcttccctctgggttggatatgggctatggaaat
catggaaataatgttgtcttccaacctagagggaactttggagtgttaaaaaatccacgt
gctcaaataccagttatgtattctggggtcctatctgggccagtgcaatatatgaatcaa
cagtatggcatacagcgaactaactccgatgctgagagttggcagcgaacgaatagtttt
cagaggggtcttataccttcccctcgtactccttcacaggtgatgcataaagctgagcga
aagtatgaagtgggtaaaataactgacgaggaacaggcaaagcagagacagcttaaaagt
attttaaataagttaactcctcaaaattttgaaagactattcgagcaagtcaaacaagta
aatattgacaatgccggtactctcactggtgtaatatctcaaatttttgataaagctcta
atggaaccgacattttgtgaaatgtatgccaatttctgctattatcttgctggcgagttg
cctgattttattgaagacgatgaaaaaattacttttaaaaggttactcttaaacaagtgc
caggaggagttcgagagaggtgagagggaagaggaagaagctaatagagaggaaggagaa
ggtgagactaaacagtccgacgaagaaagggaacagaagagagtccaggcacgaaggcgt
atgttgggcaatataagactgattggggaattgtacaagaaaaagatgttaacagaaaga
attatgcatgagtgcatcaaaaagctgttgggtcagtatcaaaatcccgacgaggaagat
attgaagcattgtgcaaactaatgagcacaattggagaaatgatagatcatcccaaagcc
aaggagcacttggatgcatattttgacatgatgaccaagctatcaaataacatgaagctt
tcttctagagtgaggttcttgctgaaggattcaattgacctgagaaaaaataggtggcaa
cagaggaggaaggttgaaggtccgaaaaagattgaggaagtgcacagggatgctgctaat
gaaaggcaggctcaagccaacagattgactcgcggattaagtatgaattcatctttcaga
aggggtcaacaacccatggactttgctccaagagggtcgaatgtattattgtctcctaat
gcacaattaagtggttttcgtggagtacctcatacaccacgtgggtatcccactcaagat
attaggactgatgagagacaccttttggataacagaatacaatcagttcaattgacccag
aggccccttggtagtgactccattacccttgggccacaaggtggtcttgctaggggaatg
tctattaaaggacagccgtctatgtcaagtatccccttctctgatatgcacagttcagat
tttaggagaactacaagtggcaatggctacggttttgtgttagatcgaccaacctacgcc
ccaagagagggaatatttccgaaaatcgctcctgataggctcgccagcccggctgctccc
gaccacatgaatttaaaggatggaaatcagagttatgggaacagggaagtacggaatcca
gaccaggtttctaacggatcccgaccaaatacacctcaaactagaagtaaggagtcaagt
tctgtacaaaaggtgttgcctgaagaacagctgcggaaaatgtcaatggaaactataaaa
gaattctacagtgctaaagatgagaaggaagttgccctgtgtgtcaaagatctgaatgct
cctggattttatccttcaatgatatacatctggataactgattcctttgagaggaaggac
atagaaagggatctactggctaagcttcttattaaccttgcaaaatcacaggatgctttg
ttaagtaaacctcaacttgtcgaagggtttgaattagttctagctagtttggaggatgct
ataacggatgcccctaaagcaccagaatttcttggtagtatctttgcaaaagttgtacta
gaaaatgtgcttccgttggcagaaattggaaggttgatttttgaaggtggggaggagcaa
ggacagcttgtagatagtgggcttgcagctaaagttattggaagagccctggagattgta
agaatagagaaaggggaaactgttttgaaagagatttgcacaggctccggtttgcgtcga
gaaaacttcaggcctccaaactctaaaagggtatcgagcttagatcaatttatatag
DBGET
integrated database retrieval system
