Apium graveolens (celery): 141724409
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Entry
141724409 CDS
T11340
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
agrv Apium graveolens (celery)
Pathway
agrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141724409
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agrv01009
]
141724409
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrv03021
]
141724409
03019 Messenger RNA biogenesis [BR:
agrv03019
]
141724409
03041 Spliceosome [BR:
agrv03041
]
141724409
Enzymes [BR:
agrv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141724409
Protein phosphatases and associated proteins [BR:
agrv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
141724409
Transcription machinery [BR:
agrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141724409
Messenger RNA biogenesis [BR:
agrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141724409
Spliceosome [BR:
agrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141724409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141724409
NCBI-ProteinID:
XP_074382657
LinkDB
All DBs
Position
5:complement(116860285..116864609)
Genome browser
AA seq
308 aa
AA seq
DB search
MDSAAVDKLIERLIEVRSSKPGKPVQLSESEIKQLCAAARDIFFNQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGFPPQANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFSVKLWKAFTDCFNCLPVAALIDDKILCMHGGLSPDLVNL
DQIRNLPRPTAIPDTGLLCDLLWSDPSSDVKGWGMNDRGVSFTFGPEKVAEFLAKHDLDL
VCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSIDGNLMCSFQILKPAVKKN
KFTISTKM
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgcagcagtagataagctaattgaacgcctaattgaggtccgatcgtccaaa
ccgggtaaacccgttcagttatcagagtccgaaatcaaacagctttgtgcagctgctcgt
gatatcttctttaatcagcctaatcttcttgaacttgaagctcccatcaagatttgtggg
gatattcatggccagtacagtgatttattacgtctcttcgaatatggtggttttcctcct
caagcaaactatctttttcttggagactatgtagatcgtggaaagcagagtttggaaact
atatgcctcttgctcgcttacaaaatcaaatatccagagaactttttccttctcagggga
aaccatgaatgtgcctctatcaacaggatttatggattttatgatgaatgtaagcgacga
tttagtgtgaaactatggaaagcctttacggattgttttaattgtcttccagtggcggct
cttatagatgataagatattgtgcatgcatgggggcctttcccctgatcttgtgaatttg
gatcaaataagaaacttgccacgaccgactgctataccggacacaggattgctctgtgat
ttactctggtcggatccaagtagtgatgtcaaaggatggggaatgaatgatcgaggagtt
tcgtttacctttggccctgagaaggtggcggagttcctagcaaagcatgacttggacctt
gtttgtcgtgctcaccaggttgtggaggatggttatgaattctttgctgagaggcagctt
gttaccatattttctgccccaaattactgtggtgaatttgataatgctggtgcaatgatg
agcatagatggaaatttgatgtgctcgttccaaattcttaagccagccgtgaaaaagaac
aagttcacgatctctacaaagatgtaa
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