Agrobacterium sp. 13-2099-1-2: A6U84_00045 Help Entry A6U84_00045       CDS       T11288                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism agrz  Agrobacterium sp. 13-2099-1-2 Pathway agrz02020   Two-component system agrz02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:agrz00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     A6U84_00045 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     A6U84_00045 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:agrz03021]     A6U84_00045 (rpoN) Transcription machinery [BR:agrz03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      A6U84_00045 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Motif Other DBs NCBI-ProteinID:  UZX41745 LinkDB All DBs Position Circular:complement(7688..9238) Genome browser AA seq 516 aa AA seqDB search MALSASLLLRQNQSLVMTPQLMQSIQLLQMTHFELTQFIAQEVERNPLLEIAANDGDLSS DSPVDAENFGDADSEGSDKAAPVTADSDDWYSDRAANLGEQLDTSFENVFPDDTEPRKPD APELAGQWKSMPGQESGESYDLDDFVAAKQTLSDHLNQQLPLAISSVEDRMIADALIGQL DETGYIAVDAVEDVAERLGAAPSAVERILETLQGFDPPGVFSRSLSECLAIQLAQKDRLD PAMRAFIDNLDLLAKRDFASLKKLCGVDEEDLLDMLAEIRTLNPRPGAGYDSTVSETIVP DIIIRPSSAGGWLVEINPETLPRVLINQTYFAEVSRHKSREGEDQDFLSECMQTAHWLTR SLDQRARTIMKVATEIVRQQDAFLVNGVDHLRPLNLKTVADAIKMHESTVSRVTSKKYML TPRGLFELKYFFSVSISSVEGGDSHSAEAVRHRIKAMIAQEAADAVLSDDDIVDNLKKSG IDLARRTVAKYREAMNIPSSVQRRREKKALARLSAF NT seq 1551 nt NT seq  +upstreamnt  +downstreamnt atggcattatctgccagccttttgctgcgtcaaaaccagtctctcgtgatgacaccgcaa ctgatgcagtccatccagctgcttcagatgacgcatttcgaactgacgcagttcatcgcg caggaggtggagcgcaatcctttgcttgaaattgcggcaaacgacggcgatttgagcagc gatagccctgttgatgcggagaatttcggcgatgccgacagcgaagggtccgacaaggcc gcgccggtaacggccgacagcgacgactggtacagcgatcgcgcggcaaatctcggcgaa cagctcgacaccagcttcgaaaatgtctttcccgacgataccgaacccagaaagcccgac gcacccgaacttgcggggcagtggaaatccatgcccgggcaggagtcaggcgagagttac gatctcgacgacttcgttgccgcgaaacagaccctcagcgaccatctcaatcagcaattg cctctcgccatatcctctgtggaagataggatgattgccgatgcgctgatcggccagctc gacgagaccggatatatcgccgtagatgccgtcgaagacgtcgctgaacggctgggggcg gcgccttcggcagtagagcgcattctggagacgcttcagggctttgatcctcccggcgtg ttttcccgctcgctgagcgaatgtctggcgatccagcttgcccagaaggacaggcttgat ccggcaatgcgggcttttatcgacaatctggatcttctggcgaaacgggatttcgcttct ctaaaaaaactctgcggcgtggatgaggaagaccttctcgacatgctggcggaaatccgc acgctcaatccgcgtccgggcgctggttacgattcgaccgtttccgagacaatcgttcct gatatcatcattcgcccctcctctgccggcggctggcttgtggaaatcaaccccgagacc ctgccgcgcgtgctcatcaaccagacctatttcgcagaggtttcaaggcacaagtcgcgc gagggagaggatcaggatttcctttccgaatgcatgcagacggcccattggctgacccgc agcctcgaccagcgcgccagaacgatcatgaaggtggcgaccgaaatcgtgcgccagcag gacgcctttctcgtcaatggcgtggaccaccttcgcccgctgaacctcaagacggtggcc gacgccatcaagatgcacgaatccaccgtcagccgggtgacgtcgaaaaaatacatgctg acgccgcgcggcctgttcgagctgaaatatttcttcagtgtttccatcagctcggtggaa ggcggtgacagccattcggcagaagcggtgcgtcatcgcatcaaggcgatgatcgcgcag gaggccgccgacgcagtgctttccgacgacgatatcgtcgataatctgaaaaagagtggt atcgatcttgcccgccggaccgtggccaaatatcgcgaggcgatgaacatcccatcctcc gttcagagacggcgcgagaagaaggccctggccagactgtcggcgttctga

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