Agrobacterium sp. 13-2099-1-2: A6U84_00405
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Entry
A6U84_00405 CDS
T11288
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz00061
Fatty acid biosynthesis
agrz00071
Fatty acid degradation
agrz01100
Metabolic pathways
agrz01212
Fatty acid metabolism
agrz02024
Quorum sensing
agrz04146
Peroxisome
Module
agrz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A6U84_00405
00071 Fatty acid degradation
A6U84_00405
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A6U84_00405
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6U84_00405
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
agrz01004
]
A6U84_00405
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrz04147
]
A6U84_00405
Enzymes [BR:
agrz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A6U84_00405
Lipid biosynthesis proteins [BR:
agrz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A6U84_00405
Exosome [BR:
agrz04147
]
Exosomal proteins
Exosomal proteins of breast milk
A6U84_00405
Exosomal proteins of breast cancer cells
A6U84_00405
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
TUG-UBL1
Motif
Other DBs
NCBI-ProteinID:
UZX41812
LinkDB
All DBs
Position
Circular:complement(83568..85280)
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AA seq
570 aa
AA seq
DB search
MSELSLGHPENVSAEKRWLASYPPGVPSEIPASANTSLVELLEKSCAKFADRKAFSSMGK
SLTYRDLDIETRAVAAWLQSRGLEKGDRVAVMMPNILQNPVAVYGILRAGMIVVNVNPLY
TPRELEHQLKDSGSKALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGLKGHIVNLVVR
KVKKLVPAYAIPGSISFKAVLKEGQGFCLKAVRLLPQDIAFLQYTGGTTGISKGAILTHA
NLLANKAQISLWLDAAFTQRKDRPEVLNFICALPLCHIFALTVNSLMGIALGGHNLLIAN
PRDIPGFVKELSHYRPHIFPGINTLFNALMNNEDFRKLDLSSLILVLGGGMAVQRPVAER
WLSMVGCPIAEGYGLSETSPVATVNRLDATEFSGTIGLPISSTEIDIRDEEGKSLPTGEV
GEICIRGPQVMAGYWQRPDETAKAMTEDGFFRSGDMGFMDERGYTKIVDRKKDMILVSGF
NVYPNEIEEVAASHPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKSLTN
YKRPKIIEFRTELPKSNVGKILRRELRNLN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattgtccctgggacatccggaaaatgtcagcgcagagaagcgctggctggca
tcctacccgccgggcgtaccttccgaaatccccgcatccgccaatacctcccttgtcgaa
cttctcgaaaagagctgcgcgaaatttgccgacaggaaggccttttccagcatgggaaag
tccctgacctaccgggatctggatattgaaacccgcgcggtggccgcatggctgcaatcc
agagggctggaaaaaggcgaccgggttgccgtgatgatgccgaatatcctgcagaacccc
gtcgccgtatacggaattttgcgggcaggcatgatcgtggtcaacgtcaatccgctctat
acgccgcgcgagctggaacaccagctgaaggattccggctcaaaagcacttttcgtactg
gagaatttcgcccatgtggcgcagcaggcggtgccgaaaaccgccgtcagacatgtggtc
gttgcggccatgggtgatctcctcggcctcaagggacatatcgtcaatcttgtggttcgc
aaggtgaagaaactggtgccggcctacgctattcccggctccatcagcttcaaggccgtg
ttgaaggaaggtcagggattttgcctgaaggcggtccgcctcctgccgcaggatattgca
ttcctgcaatataccggcggaacgacgggcatttccaaaggtgcgatcctcacccacgcc
aatcttctggccaacaaggcgcagatcagcctgtggctggatgctgcgttcacccaacgc
aaggaccgtccagaagtcctcaacttcatctgcgcgctgcccctgtgccacatctttgcg
ctgacggtgaattcgctgatgggcattgcgcttggcggccataacctgctgatcgccaat
ccacgcgatattcccggcttcgtgaaagagctgtcgcattatcgaccgcatatttttccg
ggtatcaatacgctgttcaatgcgctgatgaacaatgaggatttccgcaagctcgatctg
tcctcgctcattctcgtcctcggcggcggcatggcggtgcagcggccggtggccgagcgt
tggctttccatggtcggctgcccaatcgccgaaggttacgggctatcggaaacatcgccc
gttgccaccgttaacagactcgatgccacggaattcagcggcaccatcggcctgcctatt
tcctctacggaaatcgacattcgcgacgaggaaggcaaaagcctgccgaccggcgaggtc
ggcgagatctgcattcgcgggccgcaggtcatggccggttactggcagaggccggatgaa
accgcgaaagcaatgaccgaagacggcttcttccgttcaggcgacatgggcttcatggac
gagcgcggctacaccaagatcgtcgaccgcaagaaggacatgatcctcgtttccggtttc
aacgtctatccgaacgagatcgaggaagtggccgccagccatcccggcgtactggaatgc
gcggcaatcggggttcccgacgaacattccggcgagaccgtcaagcttttcgtcgtcaag
aaggatcagtcgctgacggaagcggaactcaaggccttctgcgccaaaagcctgacaaac
tacaaacggccgaaaatcatcgagttccgaacggagctgccgaaatcgaacgtcggcaag
atcttgcggcgtgagttgcgcaatctgaactga
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