Agrobacterium sp. 13-2099-1-2: A6U84_01540
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Entry
A6U84_01540 CDS
T11288
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6U84_01540 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrz03019
]
A6U84_01540 (groL)
03110 Chaperones and folding catalysts [BR:
agrz03110
]
A6U84_01540 (groL)
03029 Mitochondrial biogenesis [BR:
agrz03029
]
A6U84_01540 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrz04147
]
A6U84_01540 (groL)
Enzymes [BR:
agrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A6U84_01540 (groL)
Messenger RNA biogenesis [BR:
agrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A6U84_01540 (groL)
Chaperones and folding catalysts [BR:
agrz03110
]
Heat shock proteins
HSP60 / Chaperonin
A6U84_01540 (groL)
Mitochondrial biogenesis [BR:
agrz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A6U84_01540 (groL)
Exosome [BR:
agrz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A6U84_01540 (groL)
Exosomal proteins of other body fluids (saliva and urine)
A6U84_01540 (groL)
Exosomal proteins of breast cancer cells
A6U84_01540 (groL)
Exosomal proteins of colorectal cancer cells
A6U84_01540 (groL)
Exosomal proteins of bladder cancer cells
A6U84_01540 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UZX42020
LinkDB
All DBs
Position
Circular:complement(324454..326088)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKEVKFGRTAREKMLKGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQLVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGERQIGLDIAEAMQRVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAV
VQTGKPLVIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGKSKKVSISKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSTKITVKGENDDQEAGINIVRKALQSLVRQIAENAGDEASIVVGKILDRNEDNYGYNA
QTGEYGDLIQLGIVDPVKVVRTALQNAASVASLLITTEAMIAELPKKESAMPQMPGGGMG
GMDF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaagtcaaattcggccgcacagcgcgcgaaaagatgctcaagggcgtc
gacattctcgctgatgcagtgaaggtcaccctcggcccgaagggtcgtaacgtcgttatc
gacaagtccttcggcgcaccgcgcatcaccaaggacggcgtttctgtcgccaaggaaatc
gaactcgaagacaagttcgagaacatgggcgcacagctcgttcgcgaagttgcctccaag
accaacgacatcgccggtgacggcaccaccaccgcaacggttctggcccaggccatcgtt
cgcgaaggtgcaaaggcagttgctgccggcatgaacccgatggacctcaagcgcggtatc
gatctggccgttgcagaagtcgtcaaggaccttcaggccaaggccaagaagatcaacact
tcggaagaagttgcacaggtcggcacgatctctgcaaacggcgagcgtcagatcggtctc
gacattgctgaagcaatgcagcgcgtcggcaacgaaggcgtcatcaccgttgaagaagcc
aagaccgctgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccttacttcgtgaccaacccggaaaagatggttgcggacctcgaagacgcatacatc
cttctgcacgaaaagaagctctcgaacctccaggccatgctgcctgttctcgaagctgtc
gttcagaccggcaagccgctcgtcatcatcgctgaagacgtagaaggcgaagcccttgca
acgctcgtcgtcaacaagctgcgtggcggcctcaagatcgctgccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggtggtaccgtc
atttccgaagatctcggcatcaagctcgaaagcgttaccctcgacatgctcggcaagtcg
aagaaggtttcgatctccaaggaaaacaccacgatcgttgacggtgctggccagaagtcc
gacatcgaaggccgtgttgcccagatcaaggcgcagatcgaagaaaccacttccgactac
gaccgcgaaaagctgcaggaacgtcttgccaagctcgctggcggcgttgccgtgatccgc
gttggcggttcgacggaagttgaagtgaaggaaaagaaggaccgcatcgacgacgctctc
aacgcgacgcgcgctgctgttcaggaaggcatcgtaccgggcggcggcgttgccctgctg
cgttcttccacgaagatcaccgtcaagggtgagaacgacgaccaggaagccggcatcaac
atcgtccgcaaggctctgcagtctctggttcgccagattgcagaaaacgcaggtgacgaa
gcttccatcgttgttggcaagatcctcgaccggaacgaagacaactacggctacaacgca
cagaccggcgaatatggcgacctgatccagctcggcatcgtcgacccggtcaaggttgtt
cgcacggctctgcagaacgcagcttcggttgcttcgctgctgatcaccaccgaagccatg
atcgccgaacttcctaagaaggaatcggcaatgccccagatgcctggcggcggcatgggc
ggcatggacttctaa
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