Agrobacterium sp. 13-2099-1-2: A6U84_01575
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Entry
A6U84_01575 CDS
T11288
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agrz03009
]
A6U84_01575
Enzymes [BR:
agrz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
A6U84_01575
Ribosome biogenesis [BR:
agrz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A6U84_01575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UZX42027
LinkDB
All DBs
Position
Circular:333315..335291
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AA seq
658 aa
AA seq
DB search
MTFKDKPKRDGGKTFSRDKKPKGPGKPAAEREKKPVEAKAAPVQEAVMGTKPERISKIMA
RAGVASRRDIERMIMEGRVSLNGVKLDTPVMNATLSDKIEVDGMPIRGAERTRLWLYHKP
AGLVTTNSDPEGRPTVFDNLPGELPRVLSIGRLDINTEGLLLLTNDGGLSRVLELPTTGW
LRRYRVRAHGEVDQAALDKLKEGIAVDGVLYGAIDATLDRTQGHNVWITMGLREGKNREI
KNVLGALGLEVNRLIRISYGPFQLGDLPEGKVLEVRGRMLRDQLGPRLIEQSGANFDAPI
YDAPVADDEEENTPKRAPRSEWAKSDAPEGKPRFDRAAGKPEDRREKALGRLDTKRGDKP
AGKFGGKPAGKFGAKTRGEEDGEERRPARPPAGTSRTANVWMAPGAKPTRDGKERKSSAR
AEAESLFKKPSAQAEARRNVVRHADSEGEWIRSDSPREEEGGRGRGDGPRGGKSFGDRGG
KSFGDRPFRDKPREAGDRPRGDGPRGEKSFGDRPARGGKPFGDRPFRDKPREEGDRPRSD
RPRGEKSFGDRTARGEKPFGERPFRDKPREDGDRPRGDRPFGDKPRGAKPGGKPGGRPSS
GKPSFGKPGERGERSGFSGKGKGPGGGSGPGGGKPGGKGPGGKPSGGRGMTRNADRRR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaaagacaagccgaagcgtgacggtggcaagacttttagccgcgacaagaag
ccgaaaggccccggcaagcccgccgcagagcgtgaaaagaaaccggtagaagccaaggcg
gctccggtgcaggaagccgttatgggcaccaagccagagcgcatttccaagatcatggcg
cgcgccggcgttgcctcgcgccgcgatatcgagcgcatgatcatggaaggccgcgtgtcg
ctgaacggcgtcaagctggacaccccggtgatgaacgcgactctttccgacaagatcgaa
gtggatggcatgcccatccgcggggctgagcgcacgcgcctgtggctttaccacaagccc
gctggcctggtgacgaccaattccgacccggaaggccgcccgaccgttttcgacaatctg
ccgggtgaattgccgcgtgtgctctctatcggccgcctcgacatcaataccgaaggcctg
ctgctgttgaccaatgatggcggtctctcccgcgtgctggaactgccgacgaccggctgg
ctgcgccgctaccgcgtgcgcgcccatggcgaggtcgatcaggcagcgctcgacaagctg
aaggaaggcattgccgtcgacggcgtgctttatggcgctatcgacgcgacgctcgaccgc
acccagggtcacaacgtctggatcaccatgggtctgcgcgaaggcaagaaccgcgagatc
aagaacgtgctcggcgcgctcggccttgaggtcaaccgcctgatccgtatctcctacggc
ccgttccagcttggcgatctgcctgaaggcaaggtgcttgaagtgcgtggccgcatgctg
cgtgaccagcttggtccgcgcctcatcgaacaatccggcgccaatttcgacgcgccgatc
tacgatgcgcctgtcgccgacgatgaagaagaaaatacgcccaagcgcgcgccccggtcc
gaatgggcaaagagcgatgcgccggaaggcaagccgcgtttcgacagggctgccggcaaa
ccggaagatcgccgcgaaaaggcgctcggccgtctcgacaccaagcgcggtgacaagcca
gccggcaagttcggtggcaaacctgccgggaaattcggcgcgaaaacccgtggcgaagag
gatggcgaagaacgccgccccgcccgcccgcccgccggcaccagtcgcacggccaatgtc
tggatggcgcccggcgcaaagcccacccgtgatggcaaggagcggaagtcttctgcccgc
gcggaagcggaaagcctgttcaagaagccatccgcccaggcggaagcgcgccgcaacgtc
gtcaggcatgccgattccgagggcgagtggatccgttcggattccccgcgcgaagaggaa
ggcggtcgtggacgtggcgacggcccgcgcggtggaaagagctttggagatcgcggcggg
aaatccttcggtgaccgcccgttccgtgacaagccacgtgaagcgggagatcgcccgcgt
ggcgacggtcctcgcggcgagaagagcttcggagatcgccccgcacgcggtggaaaaccg
tttggcgaccgtccgttccgtgacaagccacgtgaggagggtgatcgcccgcgcagcgac
cgcccacgcggcgagaagagcttcggagatcgcacagcacgtggtgagaaacctttcggt
gagcgtccgttccgcgacaagccccgcgaagacggtgatcgcccacgcggcgaccggcct
ttcggtgacaagccaagaggcgcaaaaccgggtggaaaacccggcggcaggccctcatcg
ggcaagccttcttttggaaaaccgggtgaacgtggcgaacgttcgggtttttcaggcaag
ggcaaaggccccggtggcggtagcggccccggcggcggcaaaccgggcggcaaaggcccg
ggtggcaaaccttctggtggcaggggaatgacacgtaatgcggatcgtaggcggtga
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