Agrobacterium sp. 13-2099-1-2: A6U84_03925
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Entry
A6U84_03925 CDS
T11288
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz00190
Oxidative phosphorylation
agrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
A6U84_03925
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6U84_03925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrz03019
]
A6U84_03925
Enzymes [BR:
agrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
A6U84_03925
Messenger RNA biogenesis [BR:
agrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A6U84_03925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UZX43036
LinkDB
All DBs
Position
Circular:784333..786489
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AA seq
718 aa
AA seq
DB search
MTEGENLWDSPARFINREFSWLQFNRRVLEETLNTDHPLLERLRFLSISAANLDEFFMVR
VAGLEGQVRQKITVKTPDGKTPAEQLEDILKEIDNLQMEQQASLAVLQQYLAKEEIFIVR
PAALSEADRTWLGTEFEERIFPVLTPLSIDPAHPFPFIPNLGFSMGLQLDSVNGREPMTA
LLRLPTALDRFVRLPDEKNAIRYITLEDVVGLFIHRLYPGYTVRGFGTFRIIRDSDIEVE
EEAEDLVRFFESALKRRRRGSVIRIETDSEMPQSLRQFVVHELGVPDNRVAVLPGLLALN
TISEIVRAPRDDLKFEPYNARFPERVREHAGDCLAAIREKDMVVHHPYESFDVVVQFLLQ
AARDPEVLAIKQTLYRTSNDSPIVRALIDAAEAGKSVTALVELKARFDEEANIRWARDLE
RAGVQVVFGFIELKTHAKMSMVVRREDGKLRTYCHLGTGNYHPITAKIYTDLSFFTCNPK
IAHDMANIFNFITGYGEPEEGMKLAISPYTLRARIVKHINEEIEHAKRGAPAAIWMKMNS
LVDPEIIDTLYRASAAGVEIDLVVRGICCLRPQVAGLSDNIRVKSIVGRFLEHSRIFCFG
NGFGLPSDKALVYIGSADMMPRNLDRRVETLVPLTNPTVHEQVLSQIMLGNLIDNQQSYE
ILADGTSRRIEVRKGEEPFNAQHYFMTNPSLSGRGEALKSSAPKLIAGLISSRKKQAE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcgagaacctctgggacagccccgcgcgcttcatcaaccgcgaattctcc
tggctccagttcaatcgccgtgttctggaagaaacgctgaacacggatcatccgctgttg
gagcggctgcgtttcctgtccatctccgccgccaacctcgatgaattcttcatggtccgc
gtcgccggcctcgaaggccaggtgcgccagaagattacggtcaagacacctgacggcaag
acaccggccgagcagctggaagacattctgaaggaaatcgacaacctgcagatggagcag
caggcttcgcttgccgttctgcagcaatatctcgccaaggaagaaatcttcatcgtgcgg
cctgccgcactttccgaagcggatcgtacctggctgggcaccgagttcgaggaacgtatt
ttcccggtgctgacgccgctgtccatcgaccctgcgcacccgttccccttcattccgaac
ctcggtttctcgatgggcctgcagctcgacagcgtcaacggccgcgagccgatgacagcg
ctgttgcgtctcccgacggcgctcgaccgcttcgttcgtttgccggatgagaaaaacgcc
atccgctacatcacgcttgaagatgtggtcggcctgttcattcaccgtctttatccgggc
tataccgtccggggattcggcacgttccgcatcatccgtgacagcgatatcgaggtggag
gaagaggcggaagatctggtccgcttcttcgaaagcgcgctgaagcgccgccgccgcggt
tcggttatccgcattgagaccgacagcgaaatgccgcagtcgctccgccagttcgtggtg
cacgagcttggcgtgcctgataatcgcgttgccgttctacccggcttgctcgccctcaac
accatctcggaaatcgtgcgcgcaccgcgcgacgatctgaagttcgagccttacaacgcc
cgtttccccgagcgcgtgcgtgaacatgccggcgattgccttgccgccatccgcgaaaaa
gacatggtggttcaccacccctatgaaagcttcgacgtggttgtgcagttcctgttgcag
gctgcgcgcgaccccgaagtgctcgccatcaagcagacgctttaccgcacctccaacgac
agcccgatcgttcgcgcgctgatcgacgcggcggaagccggcaaatccgtgaccgcgctg
gtcgaattgaaggcgcgtttcgacgaagaggcgaacatccgctgggcgcgcgatctggag
cgggccggcgtgcaggtggtgttcggcttcatcgaactcaagacgcatgccaagatgtcg
atggtggtgcgccgcgaggacggcaagctcagaacctattgccacctcggcaccggcaac
taccacccgatcacggccaagatctataccgacctgtccttcttcacctgcaacccgaag
atcgcccatgacatggcgaatatcttcaacttcatcacgggttacggcgaaccggaagag
ggcatgaagctcgccatttcgccctatacgctgcgtgcgcgcatcgtgaagcacatcaac
gaagagatcgagcacgccaagcgcggtgcgccggcggcgatctggatgaagatgaactcg
ctggtcgatcccgagattatcgatacgctttaccgcgccagcgcggctggcgtggagatc
gatctcgtcgtgcgcggcatttgctgcctgcgcccacaggttgcgggtctgtcggacaat
atccgcgtcaagtcgattgtcggccgcttcctcgagcacagccgaatcttctgcttcggc
aatggtttcggccttccgtccgacaaggcgctggtctatatcggctcagccgacatgatg
ccgcgcaaccttgatcgccgcgttgaaacgctggtgccgctcaccaaccccaccgtgcac
gagcaggttctttcacagattatgctgggcaatctcattgacaaccagcagagctacgag
atacttgcggacggaacgtcgaggcgcatcgaggtgcgtaaaggcgaagaaccgttcaac
gcgcagcactatttcatgaccaatcccagcctttccggacgtggtgaagccctgaaatca
agtgcgcccaaattgattgccgggttgatttcttcccgcaagaaacaggctgaatga
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