KEGG   Agrobacterium sp. 13-2099-1-2: A6U84_04055
Entry
A6U84_04055       CDS       T11288                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
agrz  Agrobacterium sp. 13-2099-1-2
Pathway
agrz00740  Riboflavin metabolism
agrz01100  Metabolic pathways
agrz01110  Biosynthesis of secondary metabolites
agrz01240  Biosynthesis of cofactors
agrz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:agrz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    A6U84_04055 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A6U84_04055 (ribD)
Enzymes [BR:agrz01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     A6U84_04055 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     A6U84_04055 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: UZX42497
LinkDB
Position
Circular:814671..815807
AA seq 378 aa
MTSRADDEKFMARAIEVSLRHQGQTETNPSVGCVLVKDGKIIAEAVTAIGGRPHAERQAL
EIAGEAARGATAYVTLEPCSHWGKTPPCANALVEYGVARVVVAVDDPDERVSGRGYSILR
EAGIVVETGLLREQGKRALAGYLTRQVKKRPHVILKLAISSDGMIGRQGEGQVAITGPQA
RHAVHELRARCDCILVGIRTAIADDPELTVRIAGLEDRSPVRIVLDRKFELPSTSKLAGS
AREVPVIVAALSPSDLPGILPSRGEVPGRAEGGSPDRRRQQLTDAGVEILEAPTLENLLH
ILAERGMSELLVEGGAFAAKSFLEADLVDRIMLFESPVVVGEGGIETPLSRADIPGDYVL
VSETAYGPDRCFDYERPL
NT seq 1137 nt   +upstreamnt  +downstreamnt
gtgacgagccgcgccgatgacgaaaaattcatggcccgggcaatcgaggtttccctgcgt
catcagggtcaaaccgagaccaatccctccgtcggttgcgttctcgtaaaggacggaaaa
atcatcgccgaagcggtgaccgcaattggcggccgcccccatgccgaacgccaggcgctg
gaaatcgccggcgaagcggcgcgcggcgcaacagcctatgtcacccttgaaccctgctcg
cactggggcaagacgccgccctgcgccaacgcgctggtcgaatacggcgtggcccgtgtc
gttgtggcggtagacgacccggacgagcgtgtttccggtcgcggttactccatcctgcgg
gaggcgggcattgtcgtggaaaccggcctgctgcgcgaacaaggcaagagagcgcttgcg
ggttacctcacacgccaggttaaaaaacgcccgcatgtgattctgaaacttgccatttct
tccgatggcatgatcggcagacaaggggaggggcaggtagcgatcaccggtccgcaggcc
aggcacgccgtgcatgaactgagagcgcgctgcgattgcatcctcgtgggcatccgtacc
gcgatagcggacgatccggaactgaccgttcgaattgcaggtctcgaagatcgttctccg
gtccgaatcgtgcttgatcgcaagtttgaactaccgtcgacgtctaagctggcgggaagt
gcacgcgaggtgccggtaatcgtcgcggcgttatccccctctgacctgccgggtatcttg
ccctcaaggggggaggtgcccggcagggcagaggggggtagccccgaccgccgacgccaa
caactgaccgacgcgggcgtcgaaatccttgaagcaccaaccctcgagaacctccttcac
attctcgctgaacgcggcatgtcggaacttctggtcgaaggcggcgcttttgccgcaaaa
tcgttccttgaagccgatctcgtggaccgtatcatgctgtttgaaagcccggtcgtggtt
ggtgaaggcgggattgaaacgccgctcagccgtgccgatattccgggcgattatgttttg
gtcagcgaaaccgcctacgggccggatcgctgcttcgattatgaaaggccgctttga

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