Agrobacterium sp. 13-2099-1-2: A6U84_05295
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Entry
A6U84_05295 CDS
T11288
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz00260
Glycine, serine and threonine metabolism
agrz00630
Glyoxylate and dicarboxylate metabolism
agrz00670
One carbon pool by folate
agrz00785
Lipoic acid metabolism
agrz01100
Metabolic pathways
agrz01110
Biosynthesis of secondary metabolites
agrz01200
Carbon metabolism
Module
agrz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A6U84_05295 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A6U84_05295 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
A6U84_05295 (gcvP)
00670 One carbon pool by folate
A6U84_05295 (gcvP)
Enzymes [BR:
agrz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
A6U84_05295 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UZX42725
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All DBs
Position
Circular:complement(1066771..1069635)
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AA seq
954 aa
AA seq
DB search
MTTPTEFHFTDYQPYDFANRRHIGPSPSEMAEMLKVIGYKSLDALIDATVPSSIRQKVPL
TWGAALTEREALDRLRETANKNQVLTSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAMCQRVAKSKATAFFVDA
NCHPQTIALIETRAAPLGWKVIVGNPFTDLDPVDVFGAIFQYPGTHGHVSDFSGLISRLH
QTGAIAAVAADLLALTLLKSPGEMGADIAIGTSQRFGVPVGYGGPHAAYMSVKDAHKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYGVFHGPQGI
KAIAQQTHQKAVLMAKGLEKLGYVIEPETFFDTITVEVGHMQGVILRSAVAEGVNLRKVG
ATKIGMSLDERTRPATLEAVWRAFGGNFSISDFELEYRLPKELLRTSQYMTHPIFHMNRA
ESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFSDIHPFVPANQALG
YKEMIDDLSEKLCSVTGYDAFSMQPNSGAQGEYAGLLTIRNYHIANGGAHRDVCLIPTSA
HGTNPASAQMVGMKVVPVKVRENGDIDIDDFRAKAEQYAENLSCCMITYPSTHGVFEETV
REICEITHKHGGQVYLDGANMNAMVGLARPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAPYLPGHPTTDGREGAVSAAPFGSPSILPISWSYCLMMGGEGLTQATKVAILNA
NYIAERLKGAYDVLYKSETGRVAHECIIDTRPLADSCGVTVDDVAKRLVDCGFHAPTMSW
PVAGTLMIEPTESETKAEIDRFCDAMLAIREEARDIEEGRADKTNNPLKNAPHTVEDLVG
EWDRPYSREQGCFPPGAFRIDKYWSPVNRIDNVYGDRNLICTCPPMEAYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcccacggaattccatttcaccgactatcagccctatgatttcgccaaccgg
cgtcacatcgggccgtcgccgtcggaaatggcggagatgctgaaggtcatcggctacaag
agcctcgatgccctgatcgacgccaccgttccctcctccatccgccagaaggtgccgctg
acctggggtgcagcgctgaccgaacgcgaggcgctcgaccgcctgcgcgagacggccaac
aagaaccaggtgctgacctcgctgatcggccagggctattacggcacaatcacgccgccg
gtgatccagcgtaacattctggaaaacccggcctggtacaccgcctatacgccttaccag
ccagaaatcagccagggccgtcttgaggcgctgctgaactaccagaccatggtctgcgat
ctgaccggcctcgatgtcgccaatgcatcgctgcttgatgaagcgaccgccgctgccgaa
gccatggcgatgtgccagcgcgtcgcgaagtccaaggcaaccgccttcttcgtcgatgcc
aattgccatccgcagaccatcgcgctgatcgagacacgtgcggcgccactcggctggaag
gtgatcgttggtaatccctttaccgatctcgatcctgtcgacgtgttcggcgcgatcttc
cagtatccgggcacccacggtcatgtcagcgatttctcgggcctgatttcccgcctgcac
cagacgggtgccatcgctgccgttgccgccgatcttctggcgctgacgctgttgaagtca
cccggtgaaatgggtgcggatatcgccatcggcacctcgcagcgtttcggcgttccggtc
ggctatggtggtccgcatgcggcttacatgtccgtcaaggatgcacataagcgctccatg
cctggccgtctggtcggcgtctcagtcgatgcgcgcggcaatcgcgcctatcgtctgtcg
ctgcagacccgcgagcagcatatccgccgcgagaaggctacctccaacatctgcaccgcg
caggtgctgcttgcagtcatggcgtcgatgtatggcgtcttccatggcccgcagggcatc
aaggcgattgcccagcagacccaccagaaagccgttttgatggccaagggcttggagaag
cttggctacgtcatcgagccggaaaccttcttcgacaccatcaccgtcgaagtcggccat
atgcagggcgtcatcctgcgctcggccgttgcggaaggtgtgaacctgcgcaaggtcggc
gcgaccaagatcggcatgagccttgacgagcgcacgcgtcccgcgacgcttgaggcggtc
tggcgcgcattcggcggcaatttctcgatctcggatttcgagttggaatatcgcctgccg
aaggaactgctgcgcaccagccagtacatgacgcatccgatcttccacatgaaccgtgcc
gaaagcgagatgacccgttacatccgccgtctttcggaccgtgatctcgcgctcgaccgc
tcgatgatcccgctcggttcctgcaccatgaaactgaacgcaactgcggaaatgctgccc
ataacgtggccggaattttccgacatccatcccttcgtgccggccaatcaggcgctcggc
tacaaggaaatgatcgatgacctctcggaaaagctgtgctcggtcaccggttacgacgcc
ttctccatgcagccgaattccggcgcgcagggtgaatatgcggggctcctgaccatccgc
aactaccacatcgccaatggcggcgcacatcgcgacgtttgcctcattccaacctcggcg
catggcaccaatccagcgtccgcgcagatggttggcatgaaagtggtgccggtgaaagtg
cgggaaaatggcgacatcgatatcgacgattttcgagcaaaagcagagcagtatgcggaa
aacctctcgtgctgcatgatcacctatccgtccacccatggcgtgtttgaggagacggtt
cgcgagatttgcgagatcacccataaacacggtggtcaggtctatctcgacggcgccaac
atgaacgccatggtcggtcttgcccgtcccggcgatatcggttccgacgtcagccacctc
aacctgcacaagaccttctgcatcccgcatggcggcggcggtccgggcatggggccgatc
ggcgtcaaggcgcatcttgctccctatcttcccggccatccgacgacggacggtcgtgaa
ggtgcggtttcggctgcccccttcggctcgccgtcgatcctgccgatttcctggagctac
tgcctgatgatgggcggcgaagggctgacgcaggcgaccaaggttgcgatcctcaacgcc
aactacatcgccgaacggctgaagggcgcttacgacgtgctctacaagtccgaaacggga
cgtgtggcgcatgagtgcatcatcgacacccgcccgctggcagacagttgcggcgtgacg
gtggacgacgttgcaaagcgcctcgtcgactgcggtttccatgcgccgaccatgagctgg
ccggttgccggcacgctgatgatcgagccaacggaatccgagaccaaagcggaaatcgac
cgtttctgcgatgccatgctggcgatccgcgaggaagcccgcgacatcgaggaaggccgt
gcggacaagaccaacaatccgctgaagaacgcgccgcacacggtggaagatctcgtcggc
gagtgggatcgtccctacagccgcgaacagggttgcttcccgcccggcgccttccgcatc
gacaaatactggtcgccggtaaaccgcattgacaatgtctatggcgaccgcaacctcatc
tgcacctgcccgccgatggaggcttatgccgaggccgccgaataa
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