Agrobacterium sp. 13-2099-1-2: A6U84_05665
Help
Entry
A6U84_05665 CDS
T11288
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6U84_05665 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrz03400
]
A6U84_05665 (uvrA)
DNA repair and recombination proteins [BR:
agrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6U84_05665 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6U84_05665 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
BCA_ABC_TP_C
DnaJ_CXXCXGXG
AAA_29
nSTAND1
RsgA_GTPase
AAA_33
AAA_21
PLC-beta_C
Motif
Other DBs
NCBI-ProteinID:
UZX42794
LinkDB
All DBs
Position
Circular:1136537..1139458
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDRIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRILAFEEGTRLYILAPIVRGRKGEYKKELAELMKKGFQRV
KVDGQFYEIADVPVLDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAVAEFA
DKPLPPEETSAGGSANKSLNETHERMLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CDGLGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSSKWTD
LSKEAQHAILQGTDDKIEFNYQDGARSYKTVKNFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKINRMHIGEVTQMSIRMARDWFETLPENLNAKQNEIAVR
ILKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGTPQ
EVMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLKNVTAAVPLGVFTAV
TGVSGGGKSTFLIETLYKSAARRVMGAREIPAEHDRIDGFEFIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQALFDVGLG
YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLQALV
DQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKNERSYTGHFLKEL
LERRPAGKREAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgaagacgatttccatccgtggtgcccgtgagcataacctcaagggtatc
gatctggatctaccgcgcaataagctgatcgtcatgaccgggctctccggctcgggcaag
tcgtcgctcgccttcgacacaatctatgccgagggccagcgccgttatgtcgagagcctc
tcggcctatgcgcgccagttcctcgaaatgatgcagaagccggatgtagaccgcatcgag
gggctttctccggcgatttccatcgagcagaaaaccacctcgaagaacccgcgctccacg
gtcggcacggtcacggaaatctacgactatatgcgcctgctgtttgcgcgtgtcggtgtg
ccctactcgccggcgacgggcctgccgatcgagagccagacggtcagccagatggtcgac
cgtatccttgccttcgaggaaggcacgcgcctttatattctcgcgccgatcgtgcgcggc
cgcaaaggcgaatataaaaaggaactcgccgagctgatgaagaagggcttccagcgcgtc
aaggtggatggccagttctacgagatcgctgacgttcccgtcctcgacaagaagtacaaa
cacgatatcgatgtggtggtggaccgcgccgtcgtgcgcccggatatggcagcacgcctt
gccgacagtctcgagacctgcctcaagctcgccgacgggttggcagtggccgaatttgcc
gacaagcccctgccgccggaagaaacctcggctggcggctccgcaaacaaatcgctcaat
gagacccacgagcgtatgctgttttcggaaaaattcgcctgcccggtctccggcttcacc
atcccggaaatcgagccccggcttttctccttcaacaatcccttcggcgcctgccccacc
tgtgacggtctcggctcgcagcagaaggtggacgaaaacctgatcgtgcccgaacctgca
cgcaccctgcgggatggcgcgatcgccccctgggccaagtcgtcttccccctattacaac
cagacgctggaggcgctgggcaaggccttcggtttcaagctgtcgagcaaatggacggac
ctttcgaaagaggcgcagcacgccattcttcagggcactgacgacaagatcgagttcaac
tatcaggacggcgcgcgctcctacaagacggtgaagaatttcgaaggcatcgttcccaat
ctggagcgtcgctggaaagagaccgacagcgcctgggcgcgcgaggaaatcgagcgttat
atgtcggcggccccctgcccggcctgcgccggctatcgcctgaagccggaagcgctcgcc
gtcaagatcaacagaatgcacatcggcgaagtcacccagatgtcgatccgtatggcacgc
gactggttcgagacgctgccggaaaatctgaacgccaaacagaacgagatcgcggttcgc
atcctcaaggaaatccgcgaacgtctgcgattcctcaacgatgtcgggctggattatctc
agcctgtcacgcaactccggcacgctttccggcggagaaagccagcgcatccggcttgcg
tcgcagatcggctccggcctcaccggcgttctctatgttctggatgagccgtccatcggc
cttcatcagcgtgacaatgcccgcctgctcgatacgctgaagcacctgcgcgacatcggc
aatacggtgatcgtggtcgaacacgacgaggatgccattctgacggcggattacgttgtc
gatatcggccccgccgccggcattcacggtggtcaggtcatcgccgaaggcacgccgcag
gaggtgatggccaatccgaaatcgctgaccggcaaatatctatccggcgaactcggcgtc
gccgtgccggcagaacgccgcaagccgaagaagggccgcgaaatcaaggtttttggcgca
cgcggcaacaacctgaagaatgtgactgcggccgttccccttggtgttttcaccgccgtt
accggcgtgtcgggtggtggcaaatccacattcctgatcgagacgctctataagtcggca
gcacgccgcgtgatgggcgcgcgcgaaattccggccgagcatgatcgcatcgatggtttc
gaattcatcgacaaggtgatcgatatcgaccagtcgccaatcggccgcacgccacgatca
aaccccgccacctacaccggcgcattcacgccgatccgtgactggttcgccggtctgccg
gaggcgaaggcgcgcggttatgcacctggccgtttctccttcaacgtcaagggcggccgc
tgcgaagcctgccagggcgacggcgtcatcaagatcgagatgcacttcctgcctgatgtc
tatgtcacctgcgacgtctgccacggcaagcgttacaatcgcgagacgctggatgtgacc
ttcaagggcaagtccattgccgacgtgcttgatatgacggtggaagaaggcgttgaattc
ttcgccgccgttccggccgtgcgtgacaagctgcaagcgctgttcgatgtcggccttggt
tacatcaaggtcggccagcaggccaatacgctctccggcggcgaggcgcagcgcgtcaag
ctcgccaaggaactgtcaaaacgctccaccggccgcacgctctacatcctcgatgaaccg
acgacgggtctccatttccacgacgtcaacaagcttctggaaatgctgcaggcgctggtg
gatcagggcaattccgtcgtggtaatcgagcacaatctcgaagtcatcaagacggccgac
tggatcatcgatattggccccgaaggcggcacgggcggcggcgaagtggtggcaaccgga
acgccggaagacatcgtcaagaacgagcgctcctataccggccatttcctgaaggaactt
ctggaacgccggccagccggaaaacgcgaggctgcggagtaa
DBGET
integrated database retrieval system
