Agrobacterium sp. 13-2099-1-2: A6U84_05885
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Entry
A6U84_05885 CDS
T11288
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz02024
Quorum sensing
agrz03060
Protein export
agrz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
A6U84_05885 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
A6U84_05885 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6U84_05885 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
agrz02044
]
A6U84_05885 (secDF)
Secretion system [BR:
agrz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
A6U84_05885 (secDF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
SecD-TM1
MMPL
Sterol-sensing
FLgD_tudor
RE_XcyI
PIGBOS1
Motif
Other DBs
NCBI-ProteinID:
UZX42837
LinkDB
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Position
Circular:complement(1180509..1183073)
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AA seq
854 aa
AA seq
DB search
MLHFSRWKTVFIWLLVLASVFIASPNLFSDKQLEGMPAWYKDNKVTLGLDLQGGSHIMLK
IERSDIVKERLETIVGDVRTQLRDANIRYSGLTGNGQQIQVRISDPAQYEAAKTALRDLT
QPVSAGTLVGGSITEVTMNDGGDNLLRLNLTDEGVDYRLSSAVSQSIEVVRRRVDEVGTT
EPLIQRQGSDRIIVQVPGLQDPQRLKSLLNQTAKLSFRMVDTTMPVQEAMNGRPPATSEV
LYSQDDPPVPYLVERRALVSGDNLVDAQASFNQQTNEPVVTFRFDSRGAQRFAQATQQNV
GKPFAIVLDNQVISAPVIREPIIGGSGQISGSFSVQGANDLAVLLRAGALPATLTVVEER
TVGPSLGNDSITAGLTASAIGAVGVLIFMFVFYGFFGLLANIALIVNVVMLIAVLSVIGS
TLTLPGIAGIVLTIGMAVDSNVLIYERIREEVKSGKPLIQSLDNGFTRAFATIIDANLTT
LIVASVLFYMGTGPVKGFAVTLAVGIITTVFTAYTLTAWMFGYWVRRSRPKHLPKGVRTA
MFDGRDIPFMRYRRVVFMITGVIMLACVGGFIAKGLNLGIDFQGGSVIEVRAKQGEADLA
DIRERLNQLNLGEIQAQNFGTPQDVLIRIQAQDGGENAEQSAITLVRGELQDKYDFRRVE
VVGPAVSGDLTVTSTIGVVLAMAAIMIYIWVRFEWQFALGAVISMVHDVVFTIGLFVFLG
IEFNLTSIAAILTIIGYSLNDTVVIYDRVRENLRRYKKMPLSMIIDVSLNQTLSRTILTG
LTVLLALLALYLFGGEVIRSFTFAMLFGVGIGVFSSVYIAAPVLIAFKLRPDSKDAEDEK
DEKSGNAIGGKPAV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatttttcccgttggaaaacagtctttatctggttgcttgtgctggcaagcgtc
ttcatcgcatctcccaacctgttttcggacaagcagctggagggcatgcctgcctggtac
aaggacaacaaggtaacgctcggtctcgaccttcagggcggctcgcacatcatgctcaag
atcgagcgttccgacatcgtcaaggaacggcttgaaacgatcgtgggtgacgtgcgcacg
cagcttcgcgacgccaacatccgctattcggggcttaccggcaacggccagcagatccag
gttcgcatcagcgatcccgctcaatatgaagcggcgaaaaccgcgcttcgcgacctgacg
cagccggtgtccgccggaacgctggtcggcggttccatcacagaagtgacgatgaacgac
ggcggcgacaatctgctgcggctcaacctgaccgatgaaggcgtggattatcgcctgtcc
tcggccgtatcgcagtccatcgaagtcgtgcgccgccgcgttgacgaagtcggcaccacc
gaacctctcatccagcgtcaaggttccgaccgcatcatcgtacaggtgccgggcctccag
gatccgcagcgcctgaaatcgcttctcaaccagacggcaaagctgtccttccgcatggtc
gataccaccatgccggtgcaggaagcgatgaatggccgtccgcccgcgacctcagaggtt
ctttattcgcaggacgatccgccggttccctatctggtggaacgccgcgcgctcgtttcc
ggcgacaacctcgtcgatgcgcaggcaagcttcaaccagcagaccaacgaacccgtcgtc
accttccgtttcgacagccgcggtgcgcagcgctttgcgcaggcgacgcagcagaatgtc
ggcaagcctttcgccatcgtgctcgacaatcaggtcatttccgcacctgtcatccgtgag
ccgatcatcggcggttcgggacagatttccggcagtttctcggttcagggcgccaacgac
cttgcagtcctgttgcgtgcgggcgcacttccggccacgctgaccgtggttgaggaacgc
accgtcggtccgagccttggtaacgactccattaccgccggcctcacggcaagcgccatc
ggcgccgtcggcgtcctcatcttcatgttcgtcttttatggcttcttcggcctgcttgcg
aacatcgccctcatcgtcaacgtggtcatgctgatcgccgtcctcagtgtgatcggatct
acgctcaccttgcccggtattgcgggtatcgtcttgacgatcggtatggcggtggactcc
aacgttctgatctacgagcgaatacgcgaagaggtgaagagcggaaaaccgctgatccag
tcactggataatggtttcacgcgcgcctttgcgaccattatcgacgccaacctgacgacg
ctgatcgttgcaagcgtgctgttctacatgggcacgggtccggtcaagggctttgccgtc
acgcttgcggtcggtatcatcaccaccgtcttcacggcctatacgctgacggcctggatg
tttggctactgggttcgccgcagccgtccgaaacatctgccgaagggtgtacgcaccgcc
atgttcgacggtcgcgacattccgttcatgcgttatcgccgtgtggttttcatgatcacc
ggtgtgatcatgctcgcctgcgtcggcggcttcatcgccaagggcctgaacctcggcatc
gatttccagggcggctcggttatcgaagtgcgcgccaagcagggtgaggccgatcttgca
gatattcgcgagcgtctgaaccagctgaacctcggtgaaatccaggcacagaatttcggc
acgccgcaggacgttctcatacgcattcaggcgcaggacggcggcgaaaatgccgagcag
tcggcaatcaccctggtgcgcggcgagttgcaggacaagtatgatttccgtcgcgtggaa
gtcgttggtccggccgtgtccggtgacctgaccgtgacctccacgatcggcgttgtgctc
gccatggcggcgatcatgatctacatctgggttcgcttcgagtggcagtttgcactgggt
gcggtcatttcgatggtgcacgacgtggtcttcaccatcggcctgttcgtcttcctgggt
atagagttcaacctgaccagtatcgcggcgatcctgacgatcatcggttattcgctgaac
gatacggtggtcatctacgaccgtgtccgtgaaaacctccggcgatacaagaagatgcca
ctttcgatgatcatcgacgtatcgctgaaccagaccctttcgcgcacgatccttaccggt
ctgaccgtgcttctggcactgctggccctgtatctgttcggtggcgaggtcattcgttcc
ttcaccttcgcaatgttgttcggcgtcggtatcggcgttttctcctcggtctatatcgcg
gctccggtgctgatcgccttcaagctgcgtcccgacagcaaggatgcggaagacgagaag
gatgagaagtccggcaatgccatcggcggcaagcctgccgtctga
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