Agrobacterium sp. 13-2099-1-2: A6U84_07520
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Entry
A6U84_07520 CDS
T11288
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6U84_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrz03021
]
A6U84_07520
03400 DNA repair and recombination proteins [BR:
agrz03400
]
A6U84_07520
Enzymes [BR:
agrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6U84_07520
Transcription machinery [BR:
agrz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6U84_07520
DNA repair and recombination proteins [BR:
agrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6U84_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
UZX40615
LinkDB
All DBs
Position
Circular:complement(1515888..1516898)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGSVTAGDIQTVG
DIEILNPDHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLIMTIETNGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaacttatcaagccgaacaaggtcgagttcacctcgtcc
agccgcaccaaggcaacgctcgttgccgagccgctggagcgtggtttcggtcttaccctc
ggcaacgcgctgcgtcgcgttctgttgtcttctctgcgtggtgccgctgttacggccgtg
cagatcgacggtgtcctgcacgaattctcctccatccccggcgttcgggaagatgtgacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggtgacgattccaagcgc
atggtcgtgcgcaagcagggtccgggttcggtaaccgctggtgacatccagacggttggc
gacatcgagatcctgaaccccgaccacgtgatctgcacgctggacgaaggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggttacgtaccggctgagcgcaaccgcgcg
gaagatgccccgattggcctcattccggtggacagcctgtattctccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggtcaggttctcgactatgacaagctgatcatg
acgatcgagaccaacggttcggtttccggcgaagacgccgttgccttcgccgctcgcatt
cttcaggaccagctcggcgtcttcgtcaacttcgacgagccgcagaaggaagcagaagaa
gaatcggttaccgaactcgcgttcaacccggcgcttctcaagaaggtcgacgagctggaa
ctgtccgttcgttcggcaaactgcctgaagaacgacaacatcgtctatatcggcgacctg
atccagaagaccgaagccgaaatgcttcgcacgccgaactttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggtatggaagtaccggcatgg
ccgcctgagaacatcgaagatctcgcaaagcgttacgaagaccaatactaa
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