Agrobacterium sp. 13-2099-1-2: A6U84_07815
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Entry
A6U84_07815 CDS
T11288
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6U84_07815 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrz03400
]
A6U84_07815 (uvrB)
DNA repair and recombination proteins [BR:
agrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6U84_07815 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6U84_07815 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
UB2H
SWI2_SNF2
DUF2963
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
UZX40671
LinkDB
All DBs
Position
Circular:1562728..1565709
Genome browser
AA seq
993 aa
AA seq
DB search
MARSPKNSKPSNSGFEEAPQSSFEGAPLSGSVADWVKQLEAEAEAGSVETQREVASKAGK
HRKKIEIEARKEAEKAANKTAKNTTASKTARGVSIGASSDPKTRAAAGLNPVAGMDVSLE
EAANLAPGAVTATVEALSALIESGNPLFKDGKMWTPHRPARPPKSEGGVTIRMDSEYQPA
GDQPTAIADLVEGINSGERSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLY
SEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHSATRSLLERD
DCIIVASVSCIYGIGSVETYTAMTFQMQVGDRLDQRQLLADLVAQQYKRRDMDFQRGSFR
VRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLQSVKIYANSHYVTPRP
TLNGAIKSIKEELRVRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCAGIENYSRYLT
GRNPGEPPPTLFEYIPDNALLFIDESHVSVSQIGGMYRGDFRRKATLAEYGFRLPSCMDN
RPLRFEEWDAMRPLTVAVSATPGSWEMEQAGGVFAEQVIRPTGLIDPPVEVRSARSQVDD
VLGEIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRL
GAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYA
DNITGSMKRAMEETSRRREKQMAYNAEHGITPESVKAKISDILDSVYERDHVRADISGVS
GKGFADGGHLVGNNLQSHLNALEKSMRDAAADLDFEKAARLRDEIKRLKATELAVMDDPM
AKEEAKSLEGGGRSKKKETSARNGSISPLAEDISGGTEDGAASANESGKSLFAKPSLDEM
GPGSDTGKPLFRRNTLDEMTVGRTEKPVRGEVPGKPETETGKRFSPLMEGQPERTKDDPR
PLVRGKIGAGSYEDAGEQKRKSRTKGKTGRPGR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcacccaaaaattccaaaccctcgaattccggcttcgaggaagctccgcaa
tcgtcgttcgaaggcgcgccgctcagcggcagcgttgccgattgggtaaagcagctcgag
gcggaagccgaagccggctcggtggagacccagcgcgaagtcgcctcgaaagctggcaag
caccgcaagaagatcgagatcgaagcgcgcaaggaagcggaaaaagcggccaacaaaacg
gctaaaaacaccacggcttccaagacagcgcgcggcgtttccatcggcgcgtcgagcgat
ccaaaaacccgcgccgccgccggtctcaatcccgtggctggcatggacgtttccctggag
gaggcggccaatcttgcaccgggtgccgtcaccgccaccgttgaggcactatcggcgctt
atcgagagcggcaatccgctgttcaaggacggcaagatgtggacgccgcaccggccggcg
cgtccgccgaaatccgaaggcggcgttacaatccgcatggactcggagtatcaaccggca
ggcgaccagccgacggcgattgccgatctcgtggaaggcatcaattccggcgagcgcagc
caagtcctgctcggcgtcaccggctccggcaaaaccttcaccatggccaaggtgatcgag
gcaacccagcgcccggccgtcatccttgcgcccaacaagacgctggccgcgcagctctat
tccgagttcaagaacttcttccccgacaatgcggtagagtacttcgtctcttattacgat
tattatcagccggaagcctatgtgccgcgctccgacaccttcatcgagaaggaatcctcg
atcaacgaacagatcgaccggatgcgccactccgccacccgctcgctgctggaacgcgac
gactgcatcatcgtcgcttcggtttcctgcatctatggtatcggctcggtggaaacctat
accgccatgaccttccagatgcaggtgggcgaccggctggaccagcgccagcttctggcc
gaccttgtggcccagcaatacaagcgccgcgacatggatttccagcgcggctccttccgc
gtgcgcggcgataccatcgaaatcttccctgcccaccttgaggatgccgcctggcgcatc
tcgatgttcggcgacgaaatcgattccattaccgaattcgacccgctgaccggccagaaa
accggcgatctgcaatccgtcaagatctacgccaattcgcactatgtcaccccgcgcccg
acgctgaacggcgcgatcaagtcgatcaaggaagagctgagggtccgcctcgccgagctg
gaaaaggcgggacgtctgctggaagcccagcggctggaacagcgcacgcgttacgacatc
gaaatgctggaggcgaccggctcctgcgccggtatcgaaaactattcgcgttatctaacc
ggccgcaatcccggtgagccgccgccgacgctgtttgaatatatccctgataatgcgctg
ctttttattgacgaaagccacgtctcggttagccagatcggtggcatgtatcgcggcgac
ttcaggcgcaaggcgacgctggccgaatatggcttccgccttccctcctgcatggataac
cgcccgttgcgctttgaggaatgggatgcgatgcggccgctgacggtcgcggtttcggcc
acccccggctcgtgggaaatggaacaggccggcggcgtcttcgccgaacaggtcatccgc
ccgacaggactcatcgatccaccggtcgaggtgcgctccgcccgcagccaggtggacgat
gtcctcggcgaaattcgcgagaccgccgctaagggttaccgcacgctctgcaccgtgctg
accaagcgcatggctgaagacctgaccgaatatttgcacgaacagggcgttcgcgtgcgt
tacatgcactcggatatcgacacgctggaacgcatcgagatcatccgcgacctgcgcctt
ggtgccttcgacgtgcttgtcggtatcaaccttctgcgcgaaggcctcgatattccagaa
tgcgggttcgtcgcgatcctcgatgccgacaaggaaggcttcctgcgttcggaaacttcg
ctgatccagaccatcggccgcgccgcccgtaacgtcgacggcaaggtcatcctatatgcc
gacaacatcaccggctcgatgaagcgggcgatggaggaaacctcccgccgccgcgaaaag
cagatggcctataacgccgaacacggcatcacgccggaatcggtcaaggcgaagatctcc
gatattcttgattcagtttatgagcgtgatcacgtaagggccgatatttcaggcgtttcc
ggcaaaggcttcgccgatggcggccatctggtcggcaacaatctgcagtcccatctcaac
gcgctggaaaaatccatgcgcgatgccgcagccgatctggacttcgaaaaagccgcccgc
ctgcgagacgaaatcaagcgcctcaaggccaccgaactcgccgtcatggacgaccctatg
gcgaaggaagaggcgaaatcgcttgagggtggcggcagaagcaagaaaaaagaaacgagc
gcccgcaacgggtcgatctcccctcttgcggaagatatatccggcgggacagaggacggt
gccgcttccgcaaacgaaagtggaaaatctctcttcgccaaaccttcgctggacgaaatg
ggtcccggctcggacacgggcaagccgctgttccgcaggaacacgctggacgagatgacc
gttggccgcaccgagaagccggtgcgtggcgaagttcccggcaaacccgagacggaaacc
ggcaaacgtttctcaccgctcatggaaggccagcctgagcgaaccaaggacgatccccgc
cccctcgtgcgcggcaagatcggagcgggttcctatgaggatgccggcgaacagaagcgc
aaaagccggacgaaggggaagaccggccgtcccggtcgctga
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integrated database retrieval system
