Agrobacterium sp. 13-2099-1-2: A6U84_08110
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Entry
A6U84_08110 CDS
T11288
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz03420
Nucleotide excision repair
agrz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6U84_08110
03430 Mismatch repair
A6U84_08110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrz03400
]
A6U84_08110
Enzymes [BR:
agrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6U84_08110
DNA repair and recombination proteins [BR:
agrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6U84_08110
MMR (mismatch excision repair)
Other MMR factors
A6U84_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Peptidase_M13
DEAD
Motif
Other DBs
NCBI-ProteinID:
UZX40727
LinkDB
All DBs
Position
Circular:1623358..1625832
Genome browser
AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPEVPRKATNNADAGNAGGLGIAARAMAARDQARPTPDYLSGLNPEQ
REAVETLDGAVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELIGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYTAYQNRLKTLNACDFGD
LLLHPISIFRRNPDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRPKGEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKNHKLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAATDIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMEAFESLRGFLEHVALVMDAEQNENLDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYGGRGGYGQSRFDKAEPFANN
YSTPGWKRAQANKSDATRDNWGTRSGHAVERIGYGESGPRARTIDGELVAKSVADTPSKF
VVGDRVFHIKFGNGNISAIEGNKLTIDFDRAGQKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagttttgacgatatgccgttcttcgacgaagaacctgaggtgccgcgcaag
gcgacgaacaatgccgatgcaggcaacgccggcgggcttggcattgccgcgcgcgccatg
gcggcacgcgatcaggcccggcccacgcccgactatctttccggcctcaacccggagcag
cgcgaagccgtggagacactggacggcgcggttctggtgcttgcgggcgccggcaccggc
aagacccgcgttctcaccacccgcatcgcccatattctggcgaccggacgcgcctatccc
agccagattctggccgtgaccttcaccaacaaggccgcccgcgagatgaaggaacgtatt
ggcgttctggttggcggcgcggttgagggcatgccctggctcggcactttccactccatc
ggtgtaaagctcttgcgtcgccatgccgaactcatcggcctgaagtctgatttcaccatt
ctcgacaccgacgatgtggtgcggctgatcaaacagcttatccaggccgaaggtcttgat
gacaagcgctggccggccaaacaattcgccggcatgattgacggctggaagaacaagggg
ctgacgccgccggatattcccgaaggcgattcccgcgcctttgccaatggcaagggccgc
gaactttacacggcctatcagaaccggctgaaaacgctgaacgcctgcgatttcggcgat
cttctgctgcaccccatcagcatcttccgccgcaatcccgatattctgaaggagtaccac
cagaaattccgctacattctggtggacgagtatcaggacaccaatacggcgcaatatatg
tggctcaggcttcttgcccagcgccccaaaggcgagccgcaaaacgtctgctgcgtcggc
gacgatgaccagtcgatctatggctggcgcggcgccgaagtggacaacatcctgcgcttc
gacaaggattttcccggtgccaaggtcatcaagctggagcgcaactaccgctccaccgag
catattctgggcgccgccggccatctgatcgcccataatgaagggcgtctcggcaagacc
ctgttcaccgagcgcagcagccccgacgatgagaaggtcgtggtgcatgcggcctgggat
tccgaagaggaagcccgcgccgtcggtgaagaaatcgagcagcttcagcgcaagaaccat
aagctgaacgacatggccattctcgttcgcgcctccttccagatgcgcgagttcgaagac
cgtttcgtcacgcttggcctcaattaccgcgtgatcggcggtccgcgcttctacgagcgt
ctcgaaatccgcgatgccatggcctatttccgccttgtctgccagccggccgacgatctg
gccttcgagcgaatcgtcaacacccccaagcgcggcctgggcgacacgaccatccgcaat
ctgcatgattacgcccgcgcccgcgacattccgatgctggcggcagcgaccgacatcatc
gagaccgacgagctgaaaccgaaggcgcgcaaggcgctgttcgacgtggtgcaggatttc
cgccgctggcaggggcttctggaaaacaccgaacacaccacgcttgccgagcagatcctt
gacgaaagcggctatacggccatgtggcaggccgacaagacggcggaagcgcccggccga
ctggaaaacctgaaggaactcattcgctcgatggaggccttcgaaagcctgcgcggtttc
ctcgagcatgtcgcgctcgtcatggatgccgagcagaacgaaaatctcgatgccgtctcc
atcatgacgctgcattccgccaaggggctggaattcgacaccgtcttccttcccggttgg
gaagaaggtctgttcccgcaccagcgggcgctggacgaaggcggccgctccggtctggag
gaagaacgtcgtctagcctacgtcggcatcacccgcgccaagaagctatgccatatctgg
ttcgtatcgaaccggcgtatccatggtctgtggcaatccaccctgccctcgcgttttctc
gatgaactgccgccagcgcacgtggatgtcgcggcatccgacagcaattacggtggttac
ggcggacgcggcggttatggccagtcccgtttcgacaaggcggagcccttcgctaacaac
tactccacccccggctggaaacgtgcccaggccaacaagtccgacgcgacccgcgataac
tggggcacacgctccggccatgcggtcgagcggattggttatggcgaaagcgggccccgc
gcccgcacgatcgacggcgaactggtggccaaatcggttgccgacacaccgtcgaaattc
gtggtcggagaccgcgttttccatatcaaattcggcaatggcaacatctccgccatcgag
ggtaacaaactgaccatcgattttgaccgcgccggacaaaagcgtgtgctggatggattt
gtggaaaaggtttga
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