Agrobacterium sp. 13-2099-1-2: A6U84_08680
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Entry
A6U84_08680 CDS
T11288
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz00220
Arginine biosynthesis
agrz00240
Pyrimidine metabolism
agrz00250
Alanine, aspartate and glutamate metabolism
agrz01100
Metabolic pathways
agrz01110
Biosynthesis of secondary metabolites
agrz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
A6U84_08680 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A6U84_08680 (carB)
00220 Arginine biosynthesis
A6U84_08680 (carB)
Enzymes [BR:
agrz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
A6U84_08680 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
CoA_binding_2
YopH_N
Motif
Other DBs
NCBI-ProteinID:
UZX40832
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Position
Circular:1749356..1752844
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AA seq
1162 aa
AA seq
DB search
MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKKHEAARAELKAKLSGTELDK
ALDDLENQWNLGETDRKQRYMAHAIAIAAQAIDHVGLPAIIRPSFTLGGTGGGIAYNRSE
FFDIVSGGLDASPTTEVLVEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS
SALASKATGFPIAKIAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDEIEIPGFEEGEGSKNAI
RAAIGTPTPDRLRMVAQALRMGMTEEEVHENSKIDPWFIAQFKAIVDMEARVREQGLPQD
AENLRMLKAMGFSDARLAILTGKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYMYS
TYEIPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLVVRP
SYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFDSY
LTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQTTA
LAKALNVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEKLD
AAIAAYGKKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALAFAK
SQLGAGVDLPRSGTVFVSVRDDDKDRVLPAIRILVESGFRVLATGGTQRFLAEQGINAEK
INKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGAEAA
ALAIKALKAGNLEVKPLQSYFL
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgccaagatatcaagtccatcctcatcattggcgcaggaccgatcgtcatc
ggccaagcatgtgaattcgactattccggcacccaggcctgcaaggcgctgaaggaagag
ggttaccgggtcattctggtcaactccaacccggccaccatcatgaccgatccgggcctt
gccgacgcaacctatgtcgagccgatcaccccggaagttgttgccaagatcatcgctaag
gaacgcccggacgcgctgctgcccaccatgggtggccagaccgcgctcaacaccgcgctg
tccctgaagcgcatgggcgttctcgaccgctacaatgtggaaatgatcggcgccaagccc
gaagccatcgacatggccgaagaccgcgccctcttccgcgaggccatggctcgcatcggc
ctcgaaacgccgaagtccatgctggccaacgccactgaaatcaaggacgccgaccgcaag
aagcacgaagctgcccgcgccgaactcaaggcgaagctttccggtacggaactggacaag
gcgctggacgatctggaaaaccagtggaaccttggcgagaccgaccgcaagcagcgttac
atggcgcatgcgattgcaatcgccgcccaggcgatcgaccatgtcggcctgcccgccatc
atccgcccgtccttcacgctcggcggcaccggcggcggcattgcctataaccgctccgaa
ttcttcgacatcgtctcgggcggcctcgacgcttcgccgaccaccgaggtgctggtcgaa
gaatcggttctcggctggaaggaatatgagatggaagtggtccgcgacaccgcggacaat
tgcatcatcatctgctccatcgaaaacatcgatccgatgggcgtccacaccggcgattcc
atcaccgttgcgccagcgctgacgctgaccgacaaggaataccagatcatgcgcaacgcc
tcgattgcggtgctgcgtgagatcggcgtggaaaccggcggctcgaacgtgcagttcgcc
gtcaacccgaaagacggccgcctcgtcgtcatcgaaatgaacccgcgcgtttcgcgctcg
tccgctctcgcctccaaggcaaccggcttcccgatcgccaagatcgccgccaagctcgcc
atcggctatacgctcgacgagctggaaaacgatatcaccggcggcgcgacgcctgcctcg
ttcgaaccgtcgatcgactacgtcgtcaccaagatcccgcgtttcgccttcgagaagttc
ccgggcgcctcgccgatcctcacaacggccatgaagtccgtcggtgaagtcatggccatc
ggccgcaccttcgcagaatcgctgcagaaggcgctgcgcggcatggaaaccggcctcacc
ggtctcgatgaaatcgaaatccccggctttgaagagggcgaaggctccaagaacgccatc
cgcgccgccatcggcacgccgacgccggatcgcctgcgcatggtcgcccaggcgctgcgt
atgggaatgacggaagaagaagtccacgaaaactcgaagatcgacccctggttcatcgcc
cagttcaaggcaattgtggacatggaagcccgtgtccgtgagcaaggcctgccgcaggac
gcagagaacctgcgcatgctcaaagccatgggcttttccgacgcccgcctagcaattctg
acgggcaagcgcccgaaggaagtggccgagctgcgcaacagcctcaatgttcgcccggtc
ttcaagcgcatcgatacctgcgcggcagaattcgcctcgcccaccgcctacatgtattcg
acctatgaaatccccttcgtcggcgccgcccgctctgaagcgcaggtttccgaccgcaag
aaggtcgtcatcctcggcggcggtccgaaccgtatcggccagggcatcgagttcgactat
tgctgctgccatgctgccttcgcgctgaaggatgcaggcttcgaagcgatcatgatcaac
tgcaacccggaaacggtttcgaccgactacgacacctccgaccgcctctatttcgaaccg
ctgacggccgaagacgtgatcgagatcatgcgcgccgaacaggaaaagggcgaactggtc
ggcgtcatcgtgcagttcggcggccagacgccgctgaagctggccgaagcgctggaaaag
aacggtatcccgatcctcggcaccgcgcctgacatgatcgaccttgccgaagaccgcgac
cgcttccagaagctgctgatgaagctcgacctcgcccagccgaacaacggcattgcctat
tcggttgaacaggcgcgcctcgtcgcttcggaaatcggcttcccgctggtcgtgcgtcct
tcctatgttctgggtggccgagccatgcagatcatccattcggaaggccagctccagacc
tatctgctcgacacggttccgggcctcgtgccagaggacatcaagcagcgttacccgaac
gacaagaccggccagatcaacaccctgctcggcaagaacccgcttctgttcgacagctac
ctgaccaacgccgtcgaagtcgacgtcgatgcactgtgcgacggcgaaaacgtcttcgtg
tcgggcatcatggagcacatcgaagaagccggtatccactcgggcgactcggcctgctcg
ctgccttcccgttcgctgagcaaggaaaccctcgacgagctggaacgccagacgacggcg
cttgcaaaggcgctcaacgtcggtggcctgatgaacgttcagtacgcgatcaaggacggc
acgatctacgttctcgaagtcaacccgcgtgcctcccgcacggtgcccttcgttgcaaaa
accatcggtgcgccgatcgccaagatcgctgcccgcgtcatggccggcgaaaagcttgat
gcggcgattgccgcttacggcaagaaacccgatccgcgcaacctgaagcacatcgccgtc
aaggaagccgttttccccttcgcccgcttccccggcgtcgacattctgctcggaccggaa
atgcgctcgaccggcgaagtcatcggcctcgacaccgatttcgcactcgccttcgccaag
agccagctcggcgccggcgtcgacctgccgcgctccggcaccgtcttcgtctcggtgcgc
gacgacgacaaggaccgcgtgttgcccgcaatccgtattctggtcgagagcggcttcagg
gtactggcaaccggcggcacccagcgtttccttgctgaacagggcatcaacgccgagaag
atcaacaaggtgcaggaaggtcgtccgcatatcgaagacgccatccgcaaccggcaggtc
cagctggtcatcaacaccaccgacagcaacaaggcgatttccgactcgaagtcgctgcgc
cgcgcaacgctgatgcagaaggtgccatactacacgacgatggccggtgccgaagcagca
gcccttgccatcaaggcgcttaaggccggcaatctggaagtgaagcccttgcagagctac
ttcctgtaa
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