KEGG   Agrobacterium sp. 13-2099-1-2: A6U84_11320
Entry
A6U84_11320       CDS       T11288                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
agrz  Agrobacterium sp. 13-2099-1-2
Pathway
agrz00300  Lysine biosynthesis
agrz00470  D-Amino acid metabolism
agrz01100  Metabolic pathways
agrz01110  Biosynthesis of secondary metabolites
agrz01120  Microbial metabolism in diverse environments
agrz01230  Biosynthesis of amino acids
Module
agrz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:agrz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    A6U84_11320 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    A6U84_11320 (dapF)
Enzymes [BR:agrz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     A6U84_11320 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: UZX41326
LinkDB
Position
Circular:complement(2310036..2310938)
AA seq 300 aa
MADTVEFAKMNGLGNKILVVDMRGRRDMVTPSAAIALNADPATQFDQIMAIHDPRVGGTD
AFIDILNCDGTKAQACGNGTRCVVQALSSETGKTTFTFQTVAGILNAVEHEDGMISVDMG
LPRFRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAVMSMGNPHAIFWVDRDPMEFDLE
RFGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACAAAVSAARTGR
TGRKVTIDVASSPVRVPLTIEWREDNHVIMTGPAEWEWSGMVDPINGTWSRDAVAEQGAI
NT seq 903 nt   +upstreamnt  +downstreamnt
atggcggatacggtcgaatttgcgaagatgaacgggcttggcaacaagatcctcgttgtc
gacatgcgcggccgcagggatatggtgacgccttcggcggccatcgcgctcaatgccgat
cccgccacgcagttcgatcagatcatggcgatccacgatccgcgtgtcggcggcaccgat
gcattcatcgatatccttaattgcgacggcacgaaggcgcaggcctgcggcaacggcacg
cgctgcgtggtgcaggcgctgtcctctgaaaccggcaagaccaccttcaccttccagacg
gtggcgggcatcctgaacgccgttgagcatgaagacggcatgatttccgttgatatgggc
ctgccgcgttttcgctggagcgacattccgctttctgaagagttccacgatacgagccgc
atcgagttgcagatcgggccgatcgacgcgccaatcctgcattcgcccgccgtcatgtcc
atgggaaacccgcacgccattttctgggtggatcgcgatccgatggagttcgatctggag
cgcttcggcccgcttctggaaaaccacccgatgttccctgaaaaggccaatatcaccctg
gcgcaggttatttccgacagtgcgcttcgcacccgcacctgggagcgcggcgccgggctg
acgctcgcctgcggttctgccgcatgtgccgctgccgtttccgctgcgcgcaccggccgc
acgggcaggaaagtcaccatcgatgtcgcctccagccccgtgcgtgtgccgctgacaatt
gaatggcgcgaggacaaccacgtcatcatgacggggccggccgaatgggaatggtccggc
atggtcgatcccatcaacggcacctggtcgcgcgatgccgtggctgagcagggggccata
tga

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