Agrobacterium sp. 13-2099-1-2: A6U84_12105
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Entry
A6U84_12105 CDS
T11288
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrz03400
]
A6U84_12105 (addA)
Enzymes [BR:
agrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6U84_12105 (addA)
DNA repair and recombination proteins [BR:
agrz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A6U84_12105 (addA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UZX41476
LinkDB
All DBs
Position
Circular:complement(2491876..2495433)
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AA seq
1185 aa
AA seq
DB search
MMIDPIDHGPATDTPQSWIDWTSDRQRLASDPASSAWVSANAGSGKTHVLTQRVIRLLLA
GCRPSAILCLTYTKAAASEMSSRVFDRLAEWATLPDNDLGDRVAAIEGKMPDRIKLAEAR
RLFAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAATTLLAEARRSLLT
AVSTEGDTDLAQSLAYVLDLADESGLESLLTAIIANRSALRAFLIDAKQADGIDAQLRQA
MQIDAGETEETAAAAFWPLPGLSGLSLDTYLTLADEVGGSRVIDVAYALREAKRQTDSVR
RMEFIEAALLTAKGEKKSDAYVINKGMQKSAPDLVDALTLARDHVVACRNRYRLVRMLEA
TKCALVLAERLIGDFEDLKKQRSQLDFEDLIERAANLLNRDTAGAWVHYKLDQGIDHILV
DEAQDTSPVQWSIIQSLAADFFSGESARMGRRTLFAVGDEKQSIYSFQGARPERFSQERD
ETKRRVDSVEQAFHRIRLPLSFRSTEDVLAAVDQVFSDPKNASGLSADNEPVEHRSNRAG
HPGTVEVWDMVAPETAEDEEDWTAPFDALRESAPATIVARRIAARIAGMIGNQTIIEKGV
ERAIEPGDILVLVRKRHAFVNALTRELKRRKNIPVAGADRLRLTDHIAVQDLLALGRFVV
LPEDDLSLAALLKSPLFNLSEDDVFDVAATRSDTESVWQRLQTLSQDENSRFFAVAKKLK
NFIALSKTATVHDFFAAVLTLHDGRKKFLGRLGNEASDVLDEFLSFALDHERTGLPGLQA
FLSVLETDSPEVKREQDKDRGEVRIMTVHASKGLEAPVVFVVDGGSKAFNHSHVPKLRFV
EADGDAFPVWLPGSGFSNHLIRADEERLKTAAEDEYRRLLYVAMTRAADHLVVCGYRGQK
ENPECWHAIVKAALADNEKHCQPQQFMADGEEWQGLVWRKSDARSTPAPKRLPEPQTQEE
YALPAGLLTPLPALPSLPRPLSPSGAGTIIDDGADDLAVRSPLFGEKADVSSLALQRGRL
VHRMLQALPDFAESEREEAARRYAERAARFWPSAEREHLIRAVLRVMSEPAVQPAFSPNS
RAEVSIMGTMTIGRQHYAVSGRIDRLAVDGDRVILVDYKTNRVPPRDAHEIPFSHTAQLA
IYREILSPLYPGKEFVCALIYTENAAFMTVGDDAMMQALAAIKTK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgaccctatcgatcacgggcctgccacggacaccccgcaaagctggatagac
tggacgagcgatcggcagcggctcgcctccgatccggcaagttccgcctgggtttcggcc
aatgccggttccggcaagacccatgtgctgacccagcgcgtcatccgtctgcttctggcc
gggtgccgaccctccgcaattctgtgcctcacctataccaaggcagcggcgtccgaaatg
tcgagccgcgttttcgaccgtctggcggaatgggctacgttgccggataacgatcttggg
gatcgcgtcgctgccatcgaaggaaagatgccggatcgcatcaagctggccgaagcgcgg
cggctgttcgccaaggcgctggaaacgcccggtgggctgaagatccagacgatccacgcc
ttctgcgaagccttgttgcatcagttcccgctggaggccaatgtcgccggccacttctcc
gtccttgatgaccgcgccgcaacaaccctgctggccgaggcacgtcggtcgcttttaacg
gcggtttcgacggagggagacaccgatctcgcgcagtctctcgcttatgtgcttgatttg
gcggacgaaagcgggctcgaatcgctactcaccgccatcatcgccaatcgcagcgccctt
cgtgcctttttgatcgatgcaaaacaggctgatggcatcgatgcccaattgcggcaggca
atgcagatagacgcgggtgaaaccgaagaaacggcagcggcggcattctggcccttgcca
ggtctctcggggctttccctcgatacctatctgacgcttgccgatgaagtgggcggatcg
cgcgtcatagatgtcgcttatgccctgcgggaagcgaaacggcagacggattccgtgcgg
cgcatggaattcatcgaagctgcgctgttgacagccaagggcgagaaaaaatccgatgcc
tatgtcatcaacaagggcatgcagaaatccgcacccgatctcgtcgacgcgctgacgctt
gcgcgggaccatgtcgtggcctgtcgcaaccgctatcgtctggtgcgaatgctggaggcg
acgaaatgcgcgcttgttctggctgagagactgatcggcgatttcgaggatctgaaaaag
cagcgaagccagctcgattttgaggatctgatcgagcgcgccgccaatctcctcaaccgc
gatacggcgggcgcctgggtgcattacaagctagatcagggtatcgaccatattctcgtc
gatgaggcgcaggataccagccctgtgcaatggtcgatcatccagtcgctggcggcggac
ttcttcagcggcgagagcgcccgcatggggcggcgcacgctttttgccgtgggtgatgaa
aagcaatcgatctattcgttccagggcgcacgaccggagcggttttcgcaggagcgcgac
gagaccaaaaggcgtgtcgattcggtggagcaggcatttcaccgcatccgcctgccgctg
tccttccgttccacggaagatgtgctggccgccgtcgatcaggtcttttcggaccctaaa
aatgccagcggcctcagcgccgataacgagccagtcgaacaccgctccaaccgcgccggc
caccccggcaccgtggaagtctgggatatggtggcgccggaaaccgccgaggacgaagaa
gactggacggcacctttcgatgcacttcgggaaagcgcgccggccaccatcgttgcccgc
cggatcgccgcgcgcattgccggcatgatcggcaaccagacaatcatcgaaaagggcgtg
gaacgcgctattgagcccggcgatattcttgtgttggtgagaaaacgccatgctttcgtc
aatgcgctgacccgtgagctgaaacggcgcaagaacattcccgtcgctggtgccgaccgt
cttcgcctgaccgatcacatcgccgtacaggaccttctggcgcttggccgttttgtcgtg
ctgcctgaggatgacctttctctagccgcgctgttgaaaagcccgcttttcaatctctcc
gaagacgatgttttcgacgtcgctgccacacgatccgatacggagagcgtgtggcaaaga
ttgcagacgctttcgcaagacgagaacagccgcttcttcgcagtcgccaaaaagctcaag
aacttcatcgcgctttcgaaaacggcaacggttcatgatttcttcgctgcggttctgacc
ctgcatgacgggcgcaaaaagttcctgggtcgtctcggcaacgaggcgagcgatgtcctg
gacgagttcctgtcctttgcgcttgaccatgaaaggactggcttgcccggcctgcaagcc
ttcctatccgttctggaaacggattcgccggaggtgaaacgcgaacaggacaaggatcgc
ggtgaagtgcggatcatgaccgtgcacgcctccaagggtcttgaagcgccggtcgttttt
gtggtcgatggcggttcgaaggccttcaaccacagccatgtcccgaaactgcgcttcgtt
gaagcagacggggacgccttccccgtctggctgcctggcagcggtttttccaatcatctc
attcgcgccgatgaggaacgcctgaaaacggccgcggaagacgaatatcgccggctgctt
tatgtggcgatgacacgtgccgccgatcatctggtcgtttgcggttatcgcggccagaag
gaaaatcccgaatgctggcacgctatcgtcaaggcagcactcgccgacaatgaaaagcac
tgccagccgcaacagtttatggccgatggtgaagagtggcaggggcttgtctggcgcaag
tccgatgctcgttcgacccccgctccaaaaaggctgcctgaaccacagacgcaagaagaa
tatgctctcccggcggggcttcttacccccttgcccgccctgccatcattgccgaggcca
ctcagcccttccggtgcgggcaccatcattgatgacggtgcggacgatcttgccgtgcgt
tcgccgcttttcggcgaaaaagccgatgtctcctcgctggcattgcaacgcggtcggtta
gtgcatcgcatgctgcaggccctgccggattttgccgagagtgagcgggaagaggcagcc
cgccgttatgccgaacgtgccgcacggttctggccgtctgccgagcgcgaacatctgata
cgggcggttttgcgggtcatgtcagaaccagcggtgcagccggcattttcgcccaatagc
cgcgcagaagtttccattatggggaccatgacgatcggcaggcagcattatgcggtttcc
ggccgtatcgaccggctggcagtggatggcgaccgcgtcattctggtcgattacaagacg
aaccgcgtgccgccgcgcgacgcgcacgagatacccttctcccacacggcacagcttgcc
atctatcgcgaaattctgtcaccgctttatcccggcaaggaatttgtctgcgcgctgatt
tatacggaaaatgccgcttttatgacggttggtgacgatgccatgatgcaagcccttgcc
gcaataaagacaaagtga
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integrated database retrieval system
