KEGG   Agrobacterium sp. 13-2099-1-2: A6U84_12325
Entry
A6U84_12325       CDS       T11288                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
agrz  Agrobacterium sp. 13-2099-1-2
Pathway
agrz00230  Purine metabolism
agrz00240  Pyrimidine metabolism
agrz01100  Metabolic pathways
agrz01232  Nucleotide metabolism
Module
agrz_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
agrz_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:agrz00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    A6U84_12325 (nrdE)
   00240 Pyrimidine metabolism
    A6U84_12325 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agrz03400]
    A6U84_12325 (nrdE)
Enzymes [BR:agrz01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     A6U84_12325 (nrdE)
DNA repair and recombination proteins [BR:agrz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    A6U84_12325 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: UZX41512
LinkDB
Position
Circular:2543637..2545826
AA seq 729 aa
MDTLTSSAVRNTDAKQQVTAAQKHLDAGLDYHALNAMLNLYDENGKIQLDKDRLAARQYF
LQHVNQNTVFFHNLREKLDYLVTEGYYEQEVLDQYSFNFVRDLYDEAYARKFRFPTFLGA
FKYYTSYTLKTFDGKRYLERYEDRVCMVALALARGDEQLARDLMDEIISGRFQPATPTFL
NAGKKSRGELVSCFLLRVEDNMESIGRSINSALQLSKRGGGVALSLTNIREAGAPIKQIE
NQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLHAHHPDIMRFLDTKRENADEKIRIKT
LSLGVVIPDITFELARNNEDMYLFSPYDVERVYGVPFTEISVSEKYQEMVADSRIRKKKI
KAREFFQVIAEIQFESGYPYIMFEDTVNRANPIAGRISMSNLCSEILQVSEASEFNDDLS
YSHMGKDISCNLGSLNIASAMDSADFGKTIETSIRALTAVSDMSHISSVPSVEKGNDASH
AIGLGQMNLHGYLARERIFYGSEEGIDFTNIYFYTVTYHAIRASNRLATERGQSFKGFEN
SKYASGDYFDKYTDREWLPATEKVRDLFEKAGISIPTQEDWKALKQAVMETGLYNQNLQA
VPPTGSISYINHSTSSIHPIVSKIEIRKEGKIGRVYYPASYLSNDNLEYYQDAYEIGPEK
IIDTYAAATQHVDQGLSLTLFFRDTATTRDINRAQIYAWKKGIKTIYYIRLRQMALEGTQ
VQGCVSCTL
NT seq 2190 nt   +upstreamnt  +downstreamnt
ttggacacgctgacctcgagcgcggtgcgcaacacggatgccaaacaacaagtaaccgct
gcgcagaaacacctggacgcgggactggactatcacgcgctgaacgcgatgctgaacctc
tacgatgaaaacgggaagattcagctcgacaaggaccgccttgcggcacggcaatatttc
cttcagcacgtcaaccagaacacggtgtttttccataatctcagggaaaagctcgattat
ctcgtgaccgagggatattacgaacaggaggtgctggaccagtattccttcaatttcgtc
cgtgacctctacgacgaggcctatgccagaaagttccgttttccgacatttctcggcgcc
ttcaaatattatacgtcctatacgctgaagaccttcgacggaaagcgttacctggagcgt
tatgaggaccgcgtctgcatggtggcgttggctctggcgcgtggcgacgagcagcttgcc
cgcgatctgatggatgaaatcatttccggccgcttccagccggcaaccccgacctttctc
aacgctggcaagaaaagccgcggtgagctggtttcgtgttttctgctgcgtgtggaagac
aatatggaaagcatcggccggtccatcaattcagcattgcagctttccaagcgtggcggt
ggcgtagcactgtccctgaccaatattcgcgaagccggcgcgccgatcaaacagatcgaa
aaccagtcctctggcgtcattcctgtcatgaagctgctggaagattcgttctcctacgcc
aaccagcttggcgcgcgccagggcgctggcgcggtctatctgcatgcccatcacccggac
atcatgcgtttcctcgataccaagcgcgaaaacgccgacgaaaaaatccgcatcaaaacc
ctttcgctcggcgtggtgatccctgatatcaccttcgaactcgcgagaaacaacgaggat
atgtacctgttctcgccgtatgatgttgagcgggtctatggcgtgccgtttaccgagatt
tccgtcagcgaaaaatatcaggaaatggtcgccgacagccgcatccgcaagaagaagata
aaggcacgcgagttcttccaagtcatcgcagaaatccagttcgaaagcggttatccctat
atcatgttcgaggatacggtgaaccgcgccaatccgatcgccggccgtatcagcatgagc
aatctttgctcggaaatcctacaggtcagcgaggcgagcgagttcaacgacgatctctct
tacagccatatgggcaaggatatttcctgcaatctcggctcgctcaacattgcttcagca
atggattcggctgatttcggcaagacgatcgaaacctccatccgggcgctgacggccgtt
tctgacatgagccacatctcgtctgtcccttccgtggaaaagggcaatgatgcgagccac
gccatcgggcttggtcagatgaacctgcatggctatctggcgcgcgagcgcatcttctac
ggctccgaagagggcatcgatttcaccaatatctatttctacacggtgacctatcacgcc
atccgcgccagcaatcgccttgccactgaaaggggccagagcttcaagggctttgaaaac
tccaaatatgcctcgggcgactacttcgataaatataccgaccgggaatggctgcccgcg
acggaaaaggtccgcgacctttttgagaaagctggcatttccattccgacacaggaggac
tggaaagcgttgaagcaggccgtcatggagaccggcctctataaccagaaccttcaggcc
gtgccgcccacaggctcgatctcctatatcaaccactcgacctcctcgatccatcccatc
gtctcgaagattgaaattcgcaaggaaggcaagatcggccgtgtttattatccagcttcc
tacctttcgaacgacaatctcgaatattatcaggatgcctacgaaatcggtccggaaaag
atcatagatacctatgcggcggccacccagcatgtcgatcagggcctgtcgctgacactg
ttcttccgcgatacggcaacgacgcgcgatatcaaccgggcgcagatctacgcctggaaa
aaaggcatcaagaccatctactacatccgtttgcgccagatggcgctggaaggcacgcag
gttcagggctgcgtatcctgcacgctctga

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