Agrobacterium sp. 13-2099-1-2: A6U84_13270
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Entry
A6U84_13270 CDS
T11288
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A6U84_13270 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrz03400
]
A6U84_13270 (xseA)
Enzymes [BR:
agrz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
A6U84_13270 (xseA)
DNA repair and recombination proteins [BR:
agrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A6U84_13270 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UZX41688
LinkDB
All DBs
Position
Circular:2734229..2735833
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AA seq
534 aa
AA seq
DB search
MSDIFSNAALSNLAEFSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFSLKD
DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIESLEPAGAGALMAL
LEDRRRRLAAEGLFDAERKRRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV
KVQGEGSGEEVANAIRGFNALQPGGEIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAES
EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQ
MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLEMTTLNKRRAFERSASGLRP
EILLNGLRQHRQRVTERMQRAEALVERRLLQAQSRISSTDSALRSLPARLLGQLERQKER
VVTATRRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENRPLTRAAAI
ASGAVVSMEFADGRVAALTTGEATPSSDVPTPAAPKKKPVKPASSDPGNQGSLF
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattttctccaatgccgcattgagcaatcttgccgagttctcggtttccgaa
ctgtcgggttccatcaagcgaacggtggagacggctttcgatcaggtgagggtgcgcggc
gagatttccggctaccggggtccgcattcttcgggtcacgcctatttctccctgaaggac
gatcgcgcccgcatcgatgcggttatctggaagggtactttctcgcggctgaagttccgc
ccggaagagggcatggaggtcatcgccaccggcaaggtcaccacctttcccggctcctcg
aaatatcagatcgtcatagaaagcctggagccggccggcgcgggcgcgctgatggctttg
ctggaggaccgccgccggcgtctggcggcggaggggctgttcgatgcggaacgcaaacgc
cgcctgccgttcatgccgcgtgtcatcggtgttgtcacatcgcccacgggcgcagtcatt
cgcgatattctccaccggatttcggatcgctttccggtccatgtcgtcgtctggccggtc
aaggtgcagggggaaggctcgggtgaggaagtggcgaacgccattcgcggtttcaatgcg
cttcagcccggcggtgagattgcacgccccgacgtgctgatcgtcgcccgtggaggcggc
agtctggaagatctctggagcttcaacgacgaaatcgtcgtgcgcgccgctgccgagagc
gaaatcccgctgatttccgctgtggggcatgagacggatacgaccctgatcgactacgcc
gccgacgtgcgcgcaccgacaccgacgggtgccgccgaaatggccgtgccggtgcgtgcg
gaactggaggcgcagctctccggacttgcagcgcgcctttccggctcggtatcacgccaa
atggacaatcgccgacagggcgtgcgtgctctggtgcgtgcgctgccatcgcttgaccag
cttctggctctgccgcgccgtcgtttcgacgaggccgcaagcggtttgggtcgcgggctt
gaaatgacgacgctgaacaagcgccgcgcgttcgaacgctctgcttcgggtctgaggccg
gaaatcctgctgaatggtctgcggcagcatcgccagcgtgttacggaacgcatgcagagg
gccgaggcgcttgtggagcgccgcctgttgcaggcgcagtcgagaatttcctcgaccgat
tccgcgctgcgttcgctgcccgcccgcttgctcggccagttggagcggcagaaggaacgg
gtcgtcaccgcaacgcgacgtgccgataccgccgtgcttcaccgcatggcgcagaaccgc
tcgggccttgccgcccatgaccgcatcctgcagtcgctgtcctacaagaatgtgctgaac
cgcggttatgctgtcatccgcgacgaggagaaccggcccctgacccgggctgctgccatc
gcgtccggcgctgtggtgtcaatggagttcgccgacggtcgcgtggccgccctgacgaca
ggcgaggctactccatcatctgacgttcccacgcctgctgctcccaaaaagaagccggtg
aaaccggcctcttccgacccgggaaatcagggcagtctgttctga
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