Agrobacterium sp. 13-2099-1-2: A6U84_17135
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Entry
A6U84_17135 CDS
T11288
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz00550
Peptidoglycan biosynthesis
agrz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A6U84_17135 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
agrz01003
]
A6U84_17135 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agrz01011
]
A6U84_17135 (pbpC)
Enzymes [BR:
agrz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
A6U84_17135 (pbpC)
Glycosyltransferases [BR:
agrz01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
A6U84_17135 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
agrz01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
A6U84_17135 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UZX43826
LinkDB
All DBs
Position
Linear:complement(811649..813727)
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AA seq
692 aa
AA seq
DB search
MRRKKAIIVGIVSAALFVGGAAFGLDALDKAYPPPLEAAQQRSFEVLDRDGRLLRAFATP
DGRWRLKTSAAEVDPQFLRMLIAYEDQRFYDHHGIDPWALLRSAWQLASNGRIVSGASTL
SMQVARLIEPRTDRSFSAKFLQGLRALQIERRLDKAEILDLYLNIAPYGGNLEGVRAASL
AWFGKEPARLDTAEAALLVALPQLPEKRRPDRFPDAARQARERVLQRLAVERVVGEGEAE
RATLAAVPANRRDLPAYAPHMAAAARVKFANATEAHSTLRLPIQRELEAVARHAAEKLTE
KVSVAIVMADAQTGDILAEVGSADYLDTARRGFVEMSRAVRSPGSTLKPFIYGLAFENGL
IGQETIIEDRPADFSGYRPRNFDMHYQGDVSIRQALQLSLNVPAVKLLDAVSPSALMVRF
RRAGVKLVLPTTEPPGLAIALGGAGISLVDLVQLYAGLAGGGDSVRLGDGVRSAPQPLAG
DRLFADAAIWNVSDILSGVLPPLGMKQRGIAYKTGTSYGYRDAWSVGYDGRHVIGVWVGR
ADNGAVPGIAGYATAAPILFEAFEKSGVAITPMPAAPSGVARVAVSDLPANQRRFTLTAS
GLLSASRRESAPRIVYPPEGARVELSSQSGISPLVLKLQGGRAPFRWLANGRPLPDSSLR
RNSEWRPEGQGFSTLTVIDADGRASSVRVFIE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaaaaaaggcgatcatcgtcggcatcgtgtcggccgctctgtttgtaggcggt
gcggccttcggtctcgatgcgctggacaaggcctatccgccaccgctggaggctgcgcag
cagcggtccttcgaggtgctggatagagacgggcggttgctgcgcgcatttgcgacacct
gatggccgctggaggctgaaaaccagcgctgcagaagtcgatccgcagttcctgcgcatg
ctgatcgcttacgaggaccagcgtttttacgaccatcacggcattgacccttgggcgctg
ctgcgctccgcctggcaattggcaagcaacggccggatcgtctccggcgcctcgacgctt
tccatgcaggtggcgcggctgatcgaaccgcgcaccgaccggtcgttttcggcgaaattt
ctgcagggattgcgagcgctccagatcgaaagacggctcgacaaggcggaaatcctcgat
ctttatctgaatatcgcgccttatggcggcaatcttgagggtgttcgtgccgcaagcctc
gcctggtttggcaaggagcccgcccggctcgacacggcggaggcggctcttctggtggcg
ctgccgcaattgccggagaaacgccgaccggaccgctttccggatgcggcaaggcaggcg
cgggagagggttttgcagcgccttgccgtagaacgcgtggtgggtgaaggggaagcagag
cgggcgacccttgcagccgttcccgccaaccggcgtgatctgccggcctatgcaccgcat
atggcggctgccgcacgcgtgaagtttgccaatgccaccgaggcgcactcgacgctcaga
ttgccgatccagcgggaactggaagccgttgcccgccatgcagcggaaaaactgacagaa
aaggtctccgtcgccatcgtcatggccgacgcgcagaccggtgatattctggctgaagtt
ggttccgctgattatctcgatactgcaaggcgcggtttcgtggagatgagccgcgccgtg
cgctcgccgggctccaccctcaagccgttcatctatggccttgcctttgaaaatggtctc
atcgggcaggaaaccatcatcgaggatcgcccggcggatttttccggttaccgcccgcga
aatttcgatatgcattatcagggtgatgtcagcatcaggcaggcactgcaactgtcgctc
aatgtgcccgccgtaaagcttctggatgctgtcagcccgtctgcgctgatggtgcgtttt
cgccgcgcgggcgtgaagctcgtgcttcccaccaccgagcctcctgggcttgccattgcg
ctgggaggtgctggtatttcgctggttgatctggtgcagctttatgcgggccttgccggc
ggcggcgactctgtgcggctgggggacggtgtgcgctccgcgccgcaaccgcttgccgga
gatcggctgtttgccgacgctgcgatctggaacgtctccgacatcctgtccggtgtgctg
ccgccactcggcatgaagcagcgcggcatcgcctacaagaccggcaccagctacggttac
cgtgatgcctggtcggtaggttatgacgggcggcatgtcatcggcgtgtgggtcggtcgt
gccgataacggcgccgtcccgggcattgccggttatgcgacggcagccccgatcctcttc
gaggctttcgagaaatccggcgtagcgatcacgccaatgcctgctgcaccctctggcgtc
gcgcgggtggccgtgagcgaccttcccgccaaccagcggcgtttcacattgaccgcaagc
ggcctgctttcggcctcaaggcgcgaaagcgcgccgcgcatcgtctatccaccggaaggg
gctagggtggagctctctagccagtcaggcatttcgccgctagtgctgaagctgcaaggc
ggccgcgcgcccttccgctggctcgccaacggcaggccgctcccggattcttcgctccgc
cgcaacagcgaatggcgaccggaagggcaggggttttcaacgctgaccgtgatcgacgcc
gatggccgcgcttcgagcgtgcgcgttttcatcgagtga
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