Agrobacterium sp. 13-2099-1-2: A6U84_18105
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Entry
A6U84_18105 CDS
T11288
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz00910
Nitrogen metabolism
agrz01100
Metabolic pathways
agrz01120
Microbial metabolism in diverse environments
agrz01310
Nitrogen cycle
Module
agrz_M00531
Assimilatory nitrate reduction, nitrate => ammonia
agrz_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
A6U84_18105 (nirB)
Enzymes [BR:
agrz01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
A6U84_18105 (nirB)
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Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox_3
DAO
GIDA
NAD_binding_8
FAD_binding_2
AlaDh_PNT_C
3HCDH_N
FAD_binding_3
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
UZX44003
LinkDB
All DBs
Position
Linear:complement(1027580..1030027)
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AA seq
815 aa
AA seq
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MAQKLVIIGNGMAPGRMLENLFETAPGLYHVTIFNAEPRVNYDRIMLSPVLSGEKSYEDI
VIHNDEWYAANNVTLHKGAKVTGIDRDNKTVTSENGITVSYDRLVIATGSLPFIIPVPGH
QLPGVLAYRDLDDVTKMLEIAEGKGRAIVIGAGLLGLEAAYGLKRQGMDVTVIHLMPTIM
ERQLDPAAAYLLEKALNERGIDIITKANTKCILGAEKVEGIELEDGRVIKGDMVVMAVGI
RPASGLAKEAGIAVNRGIVVDDGMMTSDASIYALGECAEHRGMCYGLVAPLYESARVLAD
RLCGGSAEYHGSVTNTKLKVTGINLFSAGDFAEGDDREEIVLRDATAGVYKRLILKENRI
IGAVLYGETADGSWFFDLMKKSTDISAMRETLIFGQAYQGGSPLDPMAAVAALPDDAEIC
GCNGVCKGKITSVITSKGLTSLDDVRAHTKASASCGNCTGLVEQLMTLTLGDSYNPAAVQ
PMCKCTDLGHDDVRRLIKAKSLKTIPAVMQELEWKTSCGCAKCRPALNYYLVCDFPDEYA
DDYQSRYINERVHANIQKDGTYSVVPRMWGGVTSSSELRAIADVVDKFEIPMVKVTGGQR
IDLLGIEKEDLPAVWADLGKAGFISGQAYAKGLRTVKTCVGEQWCRFGTQDSTGLGIRIE
KFMWGSWTPAKLKLAVSGCPRNCAEATCKDIGVICVDSGFEIHFAGAAGLDIKGTEVLGL
VPTEDEALEHIVALTQMYREQARYLERIYKWAKRIGYDEVRRQIMDDADKRRAYFDRFVF
SQKFAQVDPWSERVSGHDKHEFRPMAAIGFNEAAE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaaactcgtcatcatcggcaatggcatggcaccggggcgcatgctggaaaac
cttttcgaaaccgcccccggcctctaccacgtcaccattttcaacgccgagccgcgcgtc
aattacgaccgcatcatgctctcgccagtactctcaggcgaaaagagctatgaagatatc
gtcatccacaatgacgaatggtacgcggccaacaatgtgacgctgcacaagggcgccaag
gtcaccggcatcgaccgcgacaacaagaccgtaaccagcgaaaacggcatcaccgtttcc
tacgacaggctagtgatcgccaccggttccctgcccttcatcattcccgtccctggccat
caattgccgggcgttctcgcctatcgcgatctcgacgatgtcacgaagatgcttgaaatc
gccgaaggcaagggccgcgccatcgtcatcggcgccggccttctgggtctggaagcagct
tatgggctgaagcgccagggaatggacgtcaccgtcatccatctgatgccgacgatcatg
gagcggcagctcgatccggcagcggcctatcttctggaaaaggcgctgaacgagcgcggc
atcgacatcatcaccaaggccaataccaaatgcattctcggcgcggagaaggtcgaaggc
atcgagttggaagacggtcgcgtcattaaaggcgacatggtggtgatggcggtcggcatc
cgtcccgcctcgggtctcgccaaggaagccggcatcgccgtcaatcgcggcatcgtcgtg
gatgatggcatgatgacgtcggatgcctcgatatatgcgcttggcgaatgcgccgagcat
cgcggcatgtgctacgggctggtcgcgccgctctatgaatctgcgcgggtgctggcggac
cggctttgcggcggttcagccgagtatcatggttcggtcaccaataccaaactgaaggtc
accggcatcaacctgttttccgccggcgattttgccgagggcgacgaccgcgaggaaatc
gtgctgcgcgatgccaccgccggtgtctacaagcgcctgatcctcaaggaaaatcgcatc
atcggcgcggttctttacggtgagacggcggatggttcgtggttcttcgacctgatgaag
aaatcgaccgacatttccgccatgcgcgaaaccctgatcttcggccaggcctatcaggga
gggtccccgctggaccctatggcggccgttgcagccttgccggatgatgcggaaatctgc
ggctgcaacggcgtctgcaagggcaagatcacctcggtcatcacctcgaaggggctgacc
tcgctggatgatgtgcgcgcccataccaaggcgtccgcctcctgcggcaattgcaccggc
cttgtcgagcaactgatgacgctgacgcttggcgacagctacaatcccgctgccgtgcag
cccatgtgcaaatgcacagatctcggccacgatgatgtgcgccgtctcatcaaggccaag
agcctgaagaccattcccgccgtgatgcaggaactggaatggaagacctcctgcggctgc
gccaaatgcagaccggcgctcaactactatctcgtttgcgattttcccgacgaatatgcc
gacgactaccagtcgcgttatatcaatgagcgcgtccatgccaatatccagaaggacggc
acctattccgtcgttccgcgcatgtggggcggcgtcacatcttcctccgaactgcgggcg
attgcggatgtggtcgacaagttcgaaatcccgatggtgaaggtgacaggcgggcaacgc
atcgatcttctcggcatcgagaaggaggatttgccggcggtctgggccgatctcggcaag
gccggtttcatttccggccaggcctatgccaaggggcttcgcaccgtgaagacctgcgtt
ggagaacaatggtgccgcttcggcacgcaggattccaccggcctcggcatccgcatcgaa
aaattcatgtggggctcatggacgcccgcgaagctgaagcttgccgtttccggctgtccg
cgaaactgcgctgaggcgacatgcaaggatatcggcgtcatctgcgtcgattccggtttc
gaaatccacttcgccggtgccgccggtctcgatatcaagggtacggaagtgctgggcctc
gtccctaccgaggatgaggcgctggagcatatcgtggcgttgacccagatgtaccgcgag
caggcgcgctacctcgagcgcatctataaatgggccaagcgcatcggttacgacgaagtc
cgccgccagatcatggacgatgccgacaagcgccgggcctattttgaccgcttcgtcttc
agccagaaattcgcgcaggtcgatccctggtcggaacgtgtgtccggccacgacaagcac
gaattcaggccgatggcggcaatcggtttcaacgaggcagcggagtga
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