Agrobacterium sp. 13-2099-1-2: A6U84_24200
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Entry
A6U84_24200 CDS
T11288
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6U84_24200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agrz02000
]
A6U84_24200
Transporters [BR:
agrz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A6U84_24200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
UZX44953
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All DBs
Position
pAt13-2099-1-2a:318943..319983
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AA seq
346 aa
AA seq
DB search
MKDFNITRRHFGLLAAGAAVAVSAPFAARAAGGTAVAATFPGSWEDGYRTVLTPLVKEAG
FDLKVAPAMAQDQLAKVMASPGNPPYDTLLMSPGQMAVAIENDLIEKIDPSKLKNWSLLD
PAFQGEYGPTVTVEVNGIAYNPDLVPAPKGYRDLFENPAYEGLVSWTGFASNTGVMAYSQ
IAKIFGSGPTDMDAVFKLFKEHPEHLKGVVASTNHQMTLFQQGEIAVFMCSTGNVAKLKA
LGLRAEFVQPETGSPAAPVNIHLTKGAKNPDAAYAYMDAAISKAAQDKLKMPPTEMFPTN
REVELTPGIEAYVKREQLASLVYPDWAAINKNRAEWIRQFDALVAG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactttaacatcacacgacgtcatttcggattgcttgctgccggtgcggctgta
gcggtctccgcccccttcgctgctcgtgccgctggtggcacagccgttgccgcgaccttt
cccggcagctgggaagacggctatcgcaccgtactgacgccacttgttaaggaagcaggt
ttcgacctgaaggttgcgccagctatggcgcaggatcagcttgccaaggtcatggcaagc
cccggtaacccgccttacgacacactgctgatgtcgcccggccagatggcggtcgctatc
gagaatgacctgatcgaaaagatcgatccgtcgaagctgaagaactggagcctgctcgat
ccggcgtttcagggcgagtacggcccgaccgtgaccgttgaagtcaacgggatcgcctat
aacccggatctggtgcccgcaccgaagggctatcgcgacctgttcgaaaacccggcctac
gagggcctcgtctcgtggacgggctttgcctccaataccggcgtcatggcctattcccag
atcgccaagatcttcggctcaggcccgaccgacatggatgccgttttcaagctgttcaag
gaacatccggagcatctgaaaggtgttgtcgccagcaccaaccaccagatgacactattc
cagcagggcgagatcgctgtcttcatgtgctcaaccggcaatgtcgcgaagctgaaggca
ttgggcctgagggctgagttcgtccagcccgaaacaggctctccggcagctccggtcaac
atccacctgaccaagggcgccaagaacccggacgcggcttacgcctatatggatgccgcg
atctccaaggcagcgcaggacaagctgaagatgccgccgaccgagatgttcccgaccaac
agggaggtcgaactgacgccaggcatcgaggcctatgtgaagcgcgaacagcttgcgtct
ctggtctatccggactgggcggcgatcaacaaaaaccgtgcggaatggatccgccagttc
gacgctcttgtcgccggttga
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