Agrobacterium sp. 13-2099-1-2: A6U84_24425
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Entry
A6U84_24425 CDS
T11288
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
agrz Agrobacterium sp. 13-2099-1-2
Pathway
agrz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agrz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6U84_24425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agrz02000
]
A6U84_24425
Transporters [BR:
agrz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A6U84_24425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UZX44994
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All DBs
Position
pAt13-2099-1-2a:358721..360670
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AA seq
649 aa
AA seq
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MRDGDKFSLGVTRRTFMAGLGGVAAVSVIGSSALAAAGKEAPELAALVKDGKLPPLAERL
PKNPMVVTPHEKIGTYGGTLRRGLRGSSDHNGILRMVGNQGLVRWNMDFTEVLPNLAEKW
EVNEDASQFTFHLLQGAKWSDGHPFTADDVVFAIEDCIKNKELYSATPAQLSVAGKAVDV
EKVDDFTVRFKFAAPNALYLENLATPLGQHPTLFAKHYCSKFLPKYNTALDADVKAAGVS
SWTELFRAKCGDIEIPSRWSNVDKPTLDPWVVKEPYSGGATRVVMTRNPYFWQVDTEGNQ
LPYINEVNFGISQDVESLMLNVISGKIDIQERHISVLANKPTLSQNMKKGDYRLLTLVPS
AAQQCQIYLNITHKDPEMRKMFGDKSFRQALSIALNRQEIIDIVYFGQSEGYQAGPRPTH
PWYHEKLARQNTEYDVAKANDLLDKAGYDKKNGNGMRLRPDGQPIFFSIDVIPTLYPDLV
DALELVKAQWAQIGVDIKVNTIERALYYTRGDDNAHDAAVWPGPGGLDPMLDPRDFFAFH
PQGSRYAIPWALWYTSNGQKGEEPPESQKKRFKLFDEARSTADLVERGEKMKEIFDIAAD
EFETIGLCLAVGGFGIIRNNLRNVPEKEPDSWSWPNPGPALPQQFTFTS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatggcgataaattttcactgggcgtgacgcgccgaacatttatggctgggctt
ggcggcgtcgccgccgtgtccgtcatcgggagctcggccctggctgctgccggcaaggaa
gcgccggaactggcagccctggtaaaagacggcaaactgccgccgttggcggaacgtctg
ccaaaaaatccgatggtggtgacgccgcatgaaaagatcggcacctatggcggcacattg
cgccgcggcctgcgcggttcgtcggaccataacggcatcctgcgcatggtcggcaaccag
gggctggtgcgctggaacatggactttaccgaagttctgcccaaccttgccgagaaatgg
gaggtcaatgaggacgcctcgcagttcaccttccatctgttgcagggcgcgaaatggtct
gatggacatccctttaccgcagatgacgtggtgttcgccattgaggactgcatcaagaac
aaggagctctacagcgctaccccggcgcaactctccgtcgccggtaaggcggtcgatgtc
gagaaagtcgatgatttcacggtcaggttcaaattcgcagcgccaaacgcgctctatctg
gaaaacctcgccacgccgctcggccagcatccgacgctgttcgccaagcattattgcagc
aagttcctgccgaaatacaacacggcgctcgatgccgacgtcaaggcggctggcgtgtcc
agctggacggaactgttccgcgccaagtgcggcgacatcgaaattccgtcgcgctggtcg
aatgtcgacaagccgacgctcgacccgtgggtggtcaaggaaccctattccggcggcgcg
acccgtgtggtcatgacacgcaatccttacttctggcaggtcgatacggaaggcaaccag
cttccctatatcaacgaagtcaatttcgggatttcacaggatgtcgaatcgctgatgctg
aacgtcatctccggcaagatcgacattcaggaacgccatatcagcgttctcgccaacaag
ccgacgttgtcgcagaacatgaaaaagggcgattaccgtctgttgacgctggtgccatcg
gctgcgcagcagtgccagatctacctcaacatcacccacaaagaccctgagatgcgcaag
atgttcggcgacaagtcgttccgtcaggcgctgtccatcgcgctcaaccgccaggaaatc
atcgacattgtctatttcggccagagcgagggctatcaggccgggccgcgcccgacacat
ccctggtatcacgaaaagctggcgcgtcagaacaccgaatacgatgtcgccaaggcgaac
gatcttctcgacaaggcgggttacgacaagaagaacggcaacggcatgcggctccggcct
gacggccagccgattttcttctcgatcgatgtgatcccgacactctatcccgatctggtc
gatgcgctggaactggtaaaggcgcagtgggcgcaaatcggcgtcgatatcaaggtcaac
accatcgaacgcgcgctgtactacacacgcggcgatgataacgcccatgatgcggcggtc
tggccgggtccgggcggtctcgatccgatgctcgacccgcgtgacttcttcgcgttccac
ccgcaggggtcgcgctacgccattccgtgggcgctttggtacacatccaacgggcagaag
ggggaagagccgccggaaagccagaagaagcgcttcaaactgttcgatgaagcgcgttcg
acggccgaccttgtcgagcgcggcgagaagatgaaggaaatcttcgatattgcggccgac
gagttcgagacgatcggtctttgccttgccgttggtggtttcggtatcatccgcaacaac
cttcgcaacgtgcctgagaaagaacccgacagctggtcatggcccaaccccggcccggcg
ttgccgcaacagttcaccttcacaagctga
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