Aphis gossypii (cotton aphid): 114118994
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Entry
114118994 CDS
T05869
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114118994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114118994
03012 Translation factors [BR:
ags03012
]
114118994
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114118994
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114118994
Translation factors [BR:
ags03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114118994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_19
nSTAND3
ResIII
AAA_22
ATPase
NPHP3_N
T2SSE
AAA_7
AAA_14
AAA_24
AAA_23
NACHT
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
114118994
NCBI-ProteinID:
XP_027836248
LinkDB
All DBs
Position
3:complement(33351162..33358906)
Genome browser
AA seq
1051 aa
AA seq
DB search
MPPMKPFRINKQTGPKDKNKGPRQGSKSNQHDHDDFILDNGGPSNTNDKQKSRSSHPPHL
KGRDIGLWHARKQASMREDEEMLDMARPKVKPPSHLRGRELDMWHKEQNRIWQKSKKKEQ
QKELGKCFIKLRIEEISRMEMQFQQLEEEMPIPDENIKPSVTSNSKLNTKDYSNHNYRAL
NLLTLKDEDVDENAEYIIDRYKKLEDSNFKRKFLDNITGSMEENLVASIQSNMKLQNDES
KNAYLRNELENKRKSVKYRSMCEIRKKLPSYTKKDEILELIHKNQVILISGETGCGKTTQ
MAQFILDDAIMSGRGSTCRIVCTQPRRISAISVAERVADERAERIGEASVGYQIRLERKL
GREYGSILFCTTGILLQHIQRDSALNYYSHIIIDEIHERDTISDFTLTILKSIIPVRPDI
KVILMSATLNAAAFSKYYNDCPSLNIPGFTYPVEELYLEDIYTLNKFRYFPKKQTQRPRK
IKPGDPFSEFVIPYVNEMRRFKKCPSVVLNWLENPSSEDTDYELISELINYICNNKDDGA
ILVFLSGWDQISKLTKLLKDKGFGNTSRYILIPLHSMLPTVSQKSVFESPPRGVRKIILS
TNIAETSVTIDDVVYVINNGRMKLKGFDAENNIGTLNEEWVSLANSRQRRGRAGRVRPGI
CYHLYTRGRERSFNDYVLPEMMRTSLEEVILQAKILQVGMVTPFLEKVMNPPETKTLEVA
LKLLIDLNALDEKENLTPLGFHLAKLPIGPLEGKMIILGAMFSCLSPIMTIAASLNFKDP
FVMPANKEYQCREIKKEMDEGHQSDHLMVTRAMSKFLLAKQENRAWEFCRENFLMFNTMN
MLHELKSQYAKYLCDLGFIKTPIYTDSEYNQNSNNVKLLKCVLAAGLCPNIAVSNPKIKS
NGRKFSKFVTAEDGKVEIHPKSVNSIDSYYESPLLLYHTKLKTTSIFLHDTTMIYPFPVV
LFAKSLKINGEKTDHVTFSLNPQINFTCSNRTAVFIKQVRKRLKFLIDHLMSHPEEISFN
SNSGSGKALKLVVDLVSAEEHPGVLEFPFTF
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaatgaaaccttttagaattaataagcaaactgggcctaaagacaaaaataaa
ggacctagacaaggatctaaaagtaatcagcatgatcatgatgacttcattttggacaat
ggtgggccatcaaatacgaatgataaacaaaaatcaagatcatctcatcctcctcattta
aaaggaagagatattggcttatggcatgctcgtaaacaagcaagtatgagagaggatgaa
gaaatgcttgatatggcaagacctaaagtcaagccaccttctcatttaagaggtcgtgaa
ttagatatgtggcataaagaacaaaatcgtatatggcaaaaatctaaaaagaaagaacaa
caaaaagaactaggaaaatgttttattaagttaagaattgaagaaattagtcgtatggaa
atgcaatttcaacaacttgaagaagaaatgccaattcctgatgaaaacattaaaccgtct
gttacatcaaattccaaattgaatacaaaagattatagcaatcataattatagggcttta
aatcttttgacattaaaagatgaagatgtagatgaaaatgccgagtacataatagataga
tataaaaagttggaagattcaaattttaaaagaaaatttttagataatattactggatcc
atggaagaaaatcttgtcgcatctattcaaagtaatatgaaacttcaaaatgatgaatca
aaaaatgcatatttgagaaatgaacttgaaaataaacgtaaaagtgtcaagtatagatct
atgtgtgaaatcagaaaaaaactgccttcatataccaaaaaagatgaaattttagaactg
attcataagaatcaagttatactgataagtggtgaaacaggttgtggtaaaactacccaa
atggcccaatttattcttgatgatgctattatgtctggccgtggttcaacttgtagaatt
gtttgtactcaaccaagaagaatcagtgctatatcagtggctgaacgcgttgctgatgaa
agagctgaacgtataggagaagcaagtgttggttatcaaattagactggaaagaaaactg
ggtcgtgaatatggatccatactgttttgtaccactggtattttacttcaacatatccaa
agagattcagctttaaattattattcacatattattattgatgaaatacatgaacgtgac
accattagtgattttactttaactattctcaagagcatcatacctgttagacctgatatt
aaagttatattgatgagtgcaacattaaatgctgcagcattttctaaatattacaacgat
tgtccatctttgaatatacctggtttcacatatccagttgaagaactatacctagaagat
atctatacattaaacaagtttagatattttcctaaaaaacaaacacaaagacctcgcaaa
ataaaacctggtgatccatttagtgaatttgtgattccttatgtaaatgaaatgaggaga
ttcaaaaaatgtccttcagtagtattaaattggctggaaaatccatcatctgaagataca
gattatgaattaatttcagaactcattaattacatttgtaataataaagatgatggtgca
atacttgtgtttctttcaggatgggaccaaatatcaaaactgactaaacttttaaaagat
aaaggctttggaaatacatctcgatatatattaattcctttgcattccatgttaccaact
gtatctcaaaaatctgtttttgaatcaccacctcggggtgttcgtaagatcatattatcc
acaaacatagcagaaacttcagttactatagatgatgtggtttatgtaattaataatggt
cggatgaagttaaaaggatttgatgcagaaaataatattggaactcttaatgaagaatgg
gtgagcttagctaattctagacaacgtcggggtagagcaggtcgtgtgagacctggtatt
tgttatcatttatacacaagagggcgtgaaagatcatttaatgattatgtactacctgag
atgatgcgaacaagcttagaagaagtaatacttcaagctaaaatattacaagttggtatg
gtaacaccgttcttggagaaagtaatgaatccgccagaaaccaaaactcttgaagtagct
ttaaaactattgatagacttgaatgctttggatgaaaaagaaaatttgactccattaggt
tttcatttagccaagttaccaatcgggcctcttgaaggtaaaatgattatcttaggtgca
atgtttagttgcttgagtccaataatgacaattgctgctagtttaaattttaaagatcct
tttgtcatgccagcaaacaaagaatatcaatgtcgtgaaataaaaaaagaaatggacgaa
ggacatcaaagtgatcatcttatggtcacaagagctatgagtaaatttttattagcaaaa
caagagaatagagcatgggagttttgtagagaaaatttccttatgtttaatacaatgaac
atgctgcatgaattaaaatctcaatacgctaaatatttatgtgatcttggatttattaaa
acgcccatttatacagattctgaatacaatcagaattcaaacaatgtgaagcttttgaag
tgtgttctagctgctggtttgtgccctaatattgctgtttctaaccccaaaattaagtca
aatggccgtaaattttccaaatttgttactgctgaagatggaaaagttgaaattcatccc
aagtctgtgaattcaattgatagttactacgagagtcctttattactgtaccacacaaaa
ctaaagaccacttcaatatttttacatgataccactatgatttatccatttcctgttgtg
ctgtttgcaaaaagccttaaaataaatggtgaaaaaactgaccatgttacatttagtctt
aaccctcaaataaatttcacttgctctaataggacagcagtttttataaagcaagtaaga
aaaagattgaagtttttgattgatcatttaatgtcacatcctgaagaaataagttttaat
tcaaattcaggcagtgggaaagcactcaaacttgttgttgatctcgtatctgcagaagaa
catcctggtgtattagaatttccttttacgttttaa
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