Aphis gossypii (cotton aphid): 114119009
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Entry
114119009 CDS
T05869
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03013
Nucleocytoplasmic transport
ags03015
mRNA surveillance pathway
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114119009
09122 Translation
03013 Nucleocytoplasmic transport
114119009
03015 mRNA surveillance pathway
114119009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114119009
03041 Spliceosome [BR:
ags03041
]
114119009
03009 Ribosome biogenesis [BR:
ags03009
]
114119009
03012 Translation factors [BR:
ags03012
]
114119009
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114119009
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114119009
mRNA cycle factors
Stress granule specific factors
114119009
Spliceosome [BR:
ags03041
]
Complex C
Other components
EJC/TREX
114119009
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
90S particles
Helicases
114119009
Translation factors [BR:
ags03012
]
Eukaryotic type
Initiation factors
eIF-4
114119009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_22
ResIII
UvrD-helicase
AAA_30
Cas3-like_C_2
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
114119009
NCBI-ProteinID:
XP_027836263
LinkDB
All DBs
Position
X:62258696..62262981
Genome browser
AA seq
398 aa
AA seq
DB search
MAVQCQVVDLSHVDFNTSDGVEVLSSFEDMNLREDLIRGMYAYGFEQPSAIQQRAIMPMI
KGRDVIAQAQSGTGKTATISIAMLQSIDFELRDTQVLCLSPTRELAIQIQKVILALGDYL
NVQCHACIGGVKIGEDVRKLNFGQHIVSGTPGRVFDMIRRKLLHTRNIKTLVLDEADEML
NQGFKKQIYNIYRFLPPATQVILVSATLPHEILEMTNKFMTNPFRIIVKRDELTLEEIKQ
FFVAVEQEEWKFDTLCDLYDTLTITKAIIFCCTRKKVDWLTEKMREANFTVSSMHGDMPQ
KERDVIMKEFHTGQTRVLITTDILARGIDVQQVSLVINYDLPNSRELYIHRIGRSGRFGR
KGVAINFVKMEDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcaatgtcaagtagtcgatttatcacatgtagattttaataccagtgatggt
gttgaggtactgtcttcatttgaagacatgaacctccgggaagatctcattcgcggcatg
tacgcatacggctttgaacagccttcggccatccaacagcgtgccataatgccaatgatc
aaaggacgcgacgttatagcccaagcccagtcgggtactggcaagacggccacaatttca
attgctatgttacaatccattgactttgagcttagagacacgcaagtgttatgtctttcg
ccaactcgagagctagccatacaaattcaaaaggtaatcttagcattaggagattattta
aatgttcagtgtcatgcttgtattggtggtgtcaaaattggcgaagacgtgagaaaatta
aattttggccaacacattgtttctggaactcctggacgtgtgtttgatatgataagaaga
aaattattgcatacacgtaacataaaaactttagtgttagatgaagcagatgaaatgtta
aaccaaggattcaagaaacaaatatataacatatatcgtttcttgccacctgctactcag
gttatcttagtatctgctacactgccccatgaaatattagaaatgaccaataagttcatg
accaatccttttaggataatagttaaacgtgatgaactaactcttgaagaaataaaacag
ttctttgtagcagttgaacaagaggaatggaaatttgacacattgtgtgatctgtatgat
actctaacaataactaaagcaataattttttgttgcacaagaaagaaggtggactggctc
actgagaagatgcgagaagctaatttcacagtcagttcaatgcatggagatatgccacaa
aaagagagagacgtaataatgaaagaatttcatactggacaaacaagagttttaattact
acggacattttggctcgtggtattgatgttcaacaagtttcattggtcataaattatgat
ttacctaacagtcgtgaattgtatatacacaggattggccgttctggaagatttggtcgc
aaaggtgtggcaattaattttgtaaaaatggaagatattaagattttacgcgatatcgaa
cagtattattcgacacagatcgatgaaatgcctatgaatgttgcggacttgatttga
DBGET
integrated database retrieval system
