Aphis gossypii (cotton aphid): 114119102
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Entry
114119102 CDS
T05869
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114119102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ags03041
]
114119102
03009 Ribosome biogenesis [BR:
ags03009
]
114119102
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114119102
Spliceosome [BR:
ags03041
]
Complex A
U2 snRNP components
U2 related factors
114119102
Complex B
114119102
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
114119102
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
90S particles
Helicases
114119102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
nSTAND3
AAA_19
ResIII
SRP54
ABC_tran
Microtub_bd
Flavi_DEAD
Myosin_head
AAA_7
TsaE
T2SSE
ATPase
Motif
Other DBs
NCBI-GeneID:
114119102
NCBI-ProteinID:
XP_027836372
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MSKRRLDIIDPYITKNKKVEGQVYMKPSSSTQLQTNPYTNLPFTPKYFELHKKRIQLPVF
EYKDEFMSLLKNNQCIVLVGETGSGKTTQIPQWCVEYSSVFGRKGVACTQPRRVAAMSVA
QRVSEEMDVCLGSEVGYSIRFEDCSSSRTLLKYMTDGMLLREGMSDPMLETYQVILLDEA
HERTLATDILMGVLKEVIKQRKDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTFPVEIF
YTPEPERDYLEAAIRTVIQIHMCEEVAGDILLFLTGQEEIEEACKRIKKEIDNLGPDVGE
LKCIPLYSTLPPNLQQRIFEAAPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFA
KQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRAGKCFRLYTEKAYKNEMQENTYPEI
LRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLSALDDDGNLTDLGNIM
AEFPLDPQLAKMLIASCSLSCSNEILSITAMLSVPQCFVRPSEAKKASDDSKMRFAHIDG
DHLTLLNIYHAFKQNNEDPQWCYDNFINYRSLKSADNVRQQLSRIMDRFNLKRTSTEFTS
KDYYLNIRKSLTTGFFMQVAHLERTGHYLTIKDNQTVQLHPSTVLGHKPEWVIYNEFVLT
TKNYIRTVSEVKPEWLLKYAPQYYDLQNFPQCEAKRQLEIIQAKLETKQWQEGY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgacgccttgatataattgatccgtacatcacaaagaacaaaaaggttgaa
ggacaagtatacatgaaacctagttcttcaactcaattacagacaaatccttacactaat
ttaccatttactcctaagtactttgaacttcataaaaaacgaatacaattacctgtattc
gagtacaaagatgagtttatgagccttttaaaaaataaccaatgtattgtattagttggt
gaaactggttcaggaaaaactactcaaataccacaatggtgtgtagaatattcttcagtt
tttggccgcaaaggtgttgcatgtactcaacctcgaagagtagctgctatgtctgttgct
cagcgagtttctgaagaaatggatgtttgccttggttctgaagttggttacagtatacga
tttgaagattgttcttcatctagaacacttttaaaatacatgacagatggtatgttgctc
cgtgaaggcatgtctgatcctatgttagaaacatatcaagttatacttttagatgaagct
cacgagagaactctagccacagatattttaatgggtgttcttaaagaagttattaaacaa
agaaaagatcttaaattagttatcatgtctgctacgttagatgctggaaagtttcaacaa
tattttgataatgctccacttatgaatgtccctggtcgtacattccctgtagaaatattt
tatactccagaaccagaaagagattatttagaagcagcaatccgtacagttattcaaatt
catatgtgtgaagaagttgctggggatattttactttttttaacaggacaagaagaaatt
gaagaagcttgcaaaagaataaaaaaagaaattgataatttaggaccagatgttggtgaa
ttaaagtgtattccattatattctactctacctccaaatttacaacaaagaatttttgag
gcagctccgccaaataagccaaatggagctataggacgtaaagtagtagtttccacaaac
attgctgaaacatctttaactattgatggagttgtatttgtcatagatccaggattcgca
aaacaaaaggtgtataatcctcgtatccgtgttgagtctttgcttgtatctcctattagt
aaagcttctgctcaacaaagagctggtcgtgcgggtcgtacaagagcaggaaagtgtttc
aggttatatacagaaaaagcatacaaaaatgaaatgcaagaaaatacgtaccctgaaata
ttacgttcaaatttaggttcagtagtattacaactaaagaaactgggtattgatgattta
gtacattttgattttatggatcctccagcaccagaaactttaatgagagctttggagtta
cttaactatttatctgctttggacgatgatggtaatcttacagatttgggcaatattatg
gctgagtttcctctagatccacagttagcaaagatgttgattgcttcatgttcacttagt
tgctctaatgaaattctttcaataacagctatgttgtcagtcccacaatgttttgtacga
ccttctgaagccaagaaagcatccgacgactcaaaaatgaggtttgcccacatcgatggg
gatcatcttaccttactcaatatctatcacgcttttaaacaaaataatgaagatcctcag
tggtgttatgataattttattaactatcgatcattaaagtctgctgacaacgtccgtcaa
cagttatctcgtattatggaccgtttcaatttaaaacgaacatctacagaatttacttca
aaggattattatttaaatatccgaaaatctctaactacaggattttttatgcaggttgca
catttagagcgaactggacattatttaacaataaaagacaatcagaccgtccaattgcat
ccctcaacggtgttaggtcataaacctgaatgggtaatttacaatgagtttgtattaacc
accaaaaattacattaggactgttagtgaagtaaaacctgaatggttacttaaatatgct
ccacaatattatgatctacaaaatttcccacaatgtgaagctaaaagacaattggaaata
atccaagcaaaactagagaccaaacaatggcaagaaggttattaa
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