Aphis gossypii (cotton aphid): 114119240
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Entry
114119240 CDS
T05869
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ags03009
]
114119240
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114119240
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
Pre-60S particles
Helicases
114119240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
114119240
NCBI-ProteinID:
XP_027836540
LinkDB
All DBs
Position
3:complement(52063646..52068399)
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AA seq
780 aa
AA seq
DB search
MEEETLIGFNDIATLKPEVKQKTGKRSGGFQAMGLSFPVLKGVLKRGYKVPTPIQRKTIP
IALENRDVVAMARTGSGKTACFLIPMFEKLTQHTVNGHRGIRALILSPTRELAVQTLKFL
KEIGKFTNLKSAVILGGDPMEAQFSIMHSAPDIIVATPGRFLHLCVEMSLKLPYIQYVVF
DEADRLFEMGFGEQLTEIIARLPENRQTLLFSATLPKVLVQFARAGLSDPVLIRLDVESK
IPDTLGLGFLNVRPEERDGALLCLLKYVVKPDSMTIIFAPTKHHVDYIHLLLDFQDIPNT
FIYSDLDPTARKINASKFQTGSVKTLITTDIAARGIDIPQLDVVINYTFPAKSKLFVHRV
GRCARAGKVGQAYSLVTRDEMCYLLDLHLFLGRPFSPVLETPKSDDDTDGLFGIVPQLLL
EEELGQLTNWYTSSIDVINSLKTCTNGYKNYIKSRPGASVDSVRRAKKIDLTVIAEHPMF
QKIIASDMGRIDFVSRIKNFRPETTVFEMGQSTNSIPLLQMKLLRERNMPSVINYHRKKR
EQLNDPEGVRLKKVDLPSSNQTEIQETFNDIITQRPRVTGQKKKKNLKKIKQPKQPVKSE
HFIPYQPADCYTEEGLAVDNLKSSEGILDLMGDSEQSLAKQNSNKRKWDPVSHKYVSKQS
LEKNQVKKIKSESGHWIPITYKSDRYEKWQEKSKLKNSAAEGNDEEEQKKIAPLFRFKLD
TRWGRHNAKLREQQSEHRLKLDTKHILKQRIIKEHRRKKNGRKPVKKDKIRKKSAKFNKF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaacattaattggttttaatgatatagccacattaaaacctgaggtcaaa
caaaaaactggcaaaagatcaggaggttttcaagctatgggattgagtttccctgtactg
aaaggagttctcaaaaggggttacaaagtgcccactcccatacagagaaaaacgatccct
attgctttggaaaatcgtgacgttgtagctatggctcggaccggtagtgggaaaacagct
tgttttttgataccaatgtttgaaaaattgactcagcatactgtaaatggacatagaggc
atacgagctttaattttatcaccaactcgggaacttgctgttcagacattgaagttttta
aaagaaataggaaagtttactaatttgaaatcagccgtgatattaggaggtgatccaatg
gaagcccagtttagtataatgcatagtgctccagatattattgttgctactccaggtcga
tttttgcatttatgtgtagaaatgtctttaaagttgccatatattcaatatgttgttttt
gatgaagcagataggcttttcgaaatgggttttggtgaacaattaaccgaaattattgct
cgtctaccagaaaatcgacaaactttacttttttcagctactttgccaaaagtcttagtc
caatttgctcgagcaggactttctgatcccgttcttataagattggatgtagagtcaaaa
atacctgatacactgggattaggatttcttaatgtgcgacctgaagaacgagatggtgct
cttttatgtcttctaaagtatgtggtcaaaccagattctatgactataatttttgctcca
accaaacatcatgttgattatattcatttacttttggattttcaagatataccaaataca
ttcatttactctgatttggatccaacggctagaaaaattaatgctagtaaatttcagaca
ggtagcgtaaaaactctcattacaactgatatagccgcacgtggtatagatattccacag
ctggatgttgttattaactatacatttcctgcaaagtctaaattattcgtgcacagagtt
gggcggtgtgctcgagctggaaaagttggtcaagcatatagtttagtgacacgtgatgaa
atgtgttacttattagatttacatttgttcttgggtcgtccgtttagtcctgttctcgaa
acaccgaaatcagatgatgatactgatggccttttcggtatagtaccccagttgttgttg
gaagaagaattaggacaattgacaaattggtatacatcatccattgatgtgattaactct
ttaaaaacgtgtacaaatggttataaaaattatatcaagtctaggccaggagcttcagtt
gatagtgttcgtagagctaagaaaattgacttaacagttattgcagagcatccaatgttt
caaaaaataattgcatcagatatgggacgtattgattttgttagccgtattaaaaacttt
agaccagaaactaccgtttttgaaatgggtcagtctacaaactcaataccattacttcag
atgaaattattaagggaacgaaatatgcccagtgttattaactatcatcggaaaaaacgt
gaacaactcaatgatcccgaaggagtgcggttaaaaaaagttgatttgccatctagtaat
caaactgaaattcaagaaacatttaatgatattatcactcaaagacctcgtgttactggt
caaaaaaagaaaaaaaatctaaaaaaaataaaacaaccaaaacaacccgttaagtctgaa
cattttattccatatcaacctgctgattgctatacagaagaaggattggctgttgataat
ttaaaatcaagtgaaggaatattggatttaatgggcgattcggaacaatcattagctaaa
caaaattcaaataaacgtaaatgggatccagtgagtcataaatatgtaagtaaacagagt
cttgaaaaaaatcaagtgaaaaaaatcaaatctgagtctgggcattggataccaattaca
tacaaaagtgatagatatgaaaaatggcaggaaaaatctaaattgaaaaattctgcggca
gaaggaaatgatgaagaagaacaaaagaaaatagcacctttgttccggtttaaattagat
actcgttggggtcgtcacaacgctaaattgcgggaacaacaatctgaacaccgtctgaaa
ttagacactaaacacattctaaaacagagaataattaaagaacaccgtagaaagaaaaat
ggcaggaaacctgtgaaaaaagataaaattcgtaagaagagtgcgaagtttaataaattt
taa
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