Aphis gossypii (cotton aphid): 114119386
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Entry
114119386 CDS
T05869
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ags03000
]
114119386
Transcription factors [BR:
ags03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114119386
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114119386
NCBI-ProteinID:
XP_027836715
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Position
X:complement(56198898..56205671)
Genome browser
AA seq
471 aa
AA seq
DB search
MLMDAEIKNCSGLLAGGVHHASAHMGHTYGNLNQMGMLAGIGSAGVVLGGPQGGGQQPLS
SPPPSQQQQQQSALHQQQQQQQQQQQQQQQQQQQQQQHHQHMQQAAAHHHHQVSGHVVGG
QLQLPSPNNNNSSSANKNQNVDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGS
EWKMLTETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLMKKEKYPLPGGGGPLSLG
GAGGQPCDNSVGGRNAVSQASAAVQQQMVSNSRELYHQMNGYMPNGGFGMHHDPNPYAQQ
PSPYASHMAAASQAAAASYRYDMPQMNNNAAAAASMHYLNGSYNLYSDMNQYQQGPPSTS
HSPDSIKSERISPPVQSGGHSPSPRLCQQQQLHQQQQQQQQQQQQQLGGNDLLRMYMPLE
SRLSAAAQGHQQPGVHGHPYLSHGQQQNLVQQTHPHSMSPDLQMGHLGHHM
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggacgccgaaataaaaaactgttccggcctgttggctggcggagtgcaccac
gcgtccgcgcacatgggccacacgtacggcaacctgaaccagatgggcatgttggccggc
atcggttccgcgggcgtcgtgctgggcgggccgcagggcggcggacagcagccgctctcg
tcgccgccgccgtcgcaacagcaacagcaacagtccgcgctgcaccaacagcagcagcag
cagcagcagcaacagcaacagcagcaacagcagcaacaacagcagcaacagcaccatcaa
cacatgcagcaagccgcggcgcaccaccatcatcaggtgagcggacacgtagtcggcggc
cagctgcagttgccgtcgcccaacaacaacaactcgtcgtcggccaacaagaaccagaac
gtggaccgcgtcaagcggccgatgaacgcgttcatggtgtggtcccggggacagcgccgc
aagatggcccaggaaaacccgaagatgcacaactcggagatcagcaagcggctgggcagc
gagtggaagatgctgaccgagacggagaaacggccgttcatcgacgaggccaagcggttg
cgggccgtgcacatgaaggaacatccggactacaagtaccggcccaggcgcaagacaaag
acactgatgaagaaggaaaagtatccgctgcccggcggcggcggaccgttgtccctcggc
ggtgccggcggacagccgtgcgacaactcggtgggcggccggaacgccgtctcgcaggcg
tcggccgcggtccagcagcagatggtcagcaacagccgggagctgtaccaccagatgaac
ggttacatgcccaacggcgggttcggcatgcaccacgacccgaacccgtacgcgcaacag
ccgtcgccgtacgcgtcgcacatggccgccgcgtcgcaggccgccgccgccagttaccgg
tacgacatgccgcagatgaacaacaacgcggccgcggccgcgtccatgcactacttgaac
ggcagctacaacctgtactcggacatgaaccagtaccagcaggggccgccgtccacgtcg
cacagcccggacagcatcaagtccgagaggatctcgccgcccgtccagtcgggcggacac
tcgcccagccccaggctgtgccagcaacagcagttgcaccagcaacagcagcagcagcag
cagcagcaacagcagcagctgggcggcaacgatctgctccgcatgtacatgccgctcgag
tcccggctgtccgccgccgcccagggacaccaacagcccggcgtgcacggccacccgtat
ctgtcgcacggccagcagcagaacctcgtgcagcagactcacccacactccatgtcgccc
gatctccagatgggccacttgggccatcacatgtaa
DBGET
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