Aphis gossypii (cotton aphid): 114120034
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Entry
114120034 CDS
T05869
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03030
DNA replication
ags03420
Nucleotide excision repair
ags03430
Mismatch repair
ags03440
Homologous recombination
ags03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114120034
03420 Nucleotide excision repair
114120034
03430 Mismatch repair
114120034
03440 Homologous recombination
114120034
03460 Fanconi anemia pathway
114120034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ags03000
]
114120034
03032 DNA replication proteins [BR:
ags03032
]
114120034
03400 DNA repair and recombination proteins [BR:
ags03400
]
114120034
Transcription factors [BR:
ags03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114120034
DNA replication proteins [BR:
ags03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114120034
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114120034
MMR (mismatch excision repair)
114120034
DSBR (double strand breaks repair)
HR (homologous recombination)
114120034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
CDC24_OB3
SNIPE
Motif
Other DBs
NCBI-GeneID:
114120034
NCBI-ProteinID:
XP_027837607
LinkDB
All DBs
Position
2:86324527..86329164
Genome browser
AA seq
609 aa
AA seq
DB search
MEYEKMLTKGALKSIMNNENIKDPIMQVLGVRKITAAGANERYRLLISDGYNLNSFAMLA
TQLNGMVSSGEINEFSILQIKRHIISNLTDRSKGSKQVMILIDLAVIVSGDLVGSKIGDP
KPIIDNSGQVVENGTSASVDSTPQSNALPTPHSVHSSVIDNGLQRDIDVSNIHPINSLSP
YQNKWTIRARVVNKASIRTWNNQRGEGKLFSMDLLDESGEIRATAFNSECDKFFDMVEVN
KVYFITRGAIKTANKKFSNLNNDYELTLSSETQIFPCHDFDDSKMPALKFNFVQLSQVKD
VDVDGIIDVIGVCQTAGELIKLISKTTRKELKKRDVTIVDQSLSSMTITLWDTQAEDFDG
SLQPIIAIKGSRIREFMGSKSLSLLGSTVMQINPDIEEAHRLRGWYDSLPSNVEFNSIST
RSDAIANSQFLTIKGAQLAQLGSGDKADYYSMYSYLIFVKSESALYKACPKPDCQKKVID
RNDGTYRCEKCNDETENFKYRLMLLAQLSDSTGNQWVTMFQETAENLLGTTSAELGRLLE
ESKEEYSDVFQRQMFKLFEIRARAKMETYNNETRLKVSLVNIKTIDYKVASTKLIADIKR
LSGISTSVM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgaaaaaatgctgacaaagggcgcattgaagtccattatgaacaatgaaaat
attaaagatccaatcatgcaagttcttggtgtaaggaaaattactgctgcaggagcaaat
gaaagatatcgcttacttatttctgatggttataatttaaattcttttgctatgttggct
actcaattgaatggtatggtttcttccggagagattaatgaattttccatcttacagata
aaacgtcatattattagtaatttaaccgaccgttctaaaggaagtaaacaagtcatgatc
cttatagatttggctgttatagtatccggtgatcttgtaggttcaaaaattggtgatcct
aaaccaataattgataattctggtcaagtagttgaaaatggtacttctgcttcagttgac
tctacgccccagtctaatgctttgccaacacctcattctgtccattctagtgttatagat
aatggtcttcaaagagatattgatgttagcaatattcatcctattaattctttaagccca
tatcaaaataaatggacaatcagagctagagttgtgaacaaagcttcaattcgtacttgg
aacaatcaaagaggtgaaggtaaactttttagtatggatctacttgatgaaagtggtgag
atacgtgcaactgcctttaatagtgaatgtgacaaattttttgatatggttgaagtaaac
aaagtatattttattactcgcggtgcaattaaaacagcaaataaaaagttttcaaattta
aataatgattatgaacttacactttctagtgaaacacaaattttcccatgtcatgatttt
gatgattctaaaatgcccgctctaaaatttaattttgttcaattgagtcaagtgaaagat
gttgatgttgatggtataatagatgttataggagtttgtcaaactgctggagaattgatt
aagttaatatcaaagactacaagaaaggaattaaaaaaaagagatgtgactattgtcgac
cagtctttaagttcaatgactattacattgtgggatactcaggcagaagattttgatgga
tcattgcaacctataattgctataaaaggaagtagaattagagaattcatgggtagtaaa
tcattgtcacttttaggatcaactgtaatgcaaataaatcctgacatagaagaagcacac
cgcttaaggggttggtatgattcacttccttcaaatgttgaattcaatagtatttctacc
cgttctgatgctatagcaaattctcagtttcttactattaaaggagcacaacttgcccaa
cttggaagtggagataaagctgattattatagtatgtactcgtatttgatttttgtgaaa
tctgaatctgctctatataaagcatgcccaaaaccagattgtcaaaaaaaagttattgat
cgaaatgatggaacataccgttgtgaaaagtgtaatgatgaaactgaaaattttaaatat
agattgatgctcttagcacaattgagtgactcgactggaaaccagtgggtaactatgttc
caagaaacagctgaaaatctattgggcactactagtgcagaattaggaagattgctagaa
gagtctaaggaagaatatagtgatgtttttcaaagacaaatgtttaaattatttgaaatt
agagctagagcaaaaatggagacatataacaatgagacaaggttaaaagtatctttagtc
aatataaaaacaattgattataaggtagcttctacaaaattaatagctgatattaaaagg
ttgagtggaatttcaacatcagtaatgtaa
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