Aphis gossypii (cotton aphid): 114120047
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Entry
114120047 CDS
T05869
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114120047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ags04121
]
114120047
03036 Chromosome and associated proteins [BR:
ags03036
]
114120047
Enzymes [BR:
ags01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114120047
Ubiquitin system [BR:
ags04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114120047
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
114120047
Noncanonical PRC1 (PRC1.1)
114120047
Noncanonical PRC1 (PRC1.3/1.5)
114120047
Noncanonical PRC1 (PRC1.6)
114120047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
zf-RING_4
zf-RING_5
zf-RING_6
RING_XB3-XBAT31
zf-rbx1
zf-UDP
zf-C3HC4_5
TRAF3_RING
Sina_RING
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
114120047
NCBI-ProteinID:
XP_050060127
LinkDB
All DBs
Position
3:complement(5416146..5420147)
Genome browser
AA seq
344 aa
AA seq
DB search
MSRYRKKITKYNADPMGLTKTWELSLYELHRSPQEAITDNTEIAVSPRSLHSELMCPICL
DMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYP
SRDEYEAHQTRVLEKLNKSHSQANLVQSINEGIKLQTQNRLQRTKKNQHEELNESSSSTT
SKPSNSSSRDNVTRTMVQTKVAKKMKSVMISEKEGPTSTVDTSDITECDGTSKGVAVDEI
ELVFKPHPTEMASDNQLIRVLKENSVRYIKTTANATVDHLSKYLAMRLTLDLGPELPERA
LNFLIYVAPTADQFVPLSGNQSLRNVHDKYWKVNKPLEMFYSFN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatatcggaaaaaaatcacaaaatataatgcagatccaatgggacttaccaaa
acttgggagctttcattatacgaattgcatagatcacctcaagaagctataactgacaat
actgaaattgctgtgtctccacgaagtctacatagtgaattaatgtgtccaatatgtttg
gatatgttgaaaaaaactatgactactaaagagtgtcttcacagattctgttcagactgt
attgtgactgctcttcgttcaggtaataaagaatgtcctacttgtcgtaaaaaactagta
tctaaaaggtctctacgcccagacccaaattttgatcttcttatatctaagatatatcca
agccgtgatgaatatgaagcacatcaaactagagtattagaaaagttaaataaaagtcac
agtcaggccaatttagttcaatcaataaatgaaggtattaaattacaaactcaaaatcga
ctacaacgaaccaaaaagaaccaacatgaagaactaaatgaaagtagctcatcaactact
tcaaaaccttcaaatagttcaagtcgagacaatgtaacaagaacaatggtgcaaacaaaa
gtggcaaagaaaatgaaatctgttatgatctcagaaaaagaaggacccacttcaactgtt
gacacctcagatataactgaatgtgatggtacatcaaaaggtgtggcggtagatgaaata
gaactagtgtttaaacctcatcctacagaaatggccagtgataatcaattgattagagtt
ttgaaagaaaactctgtacgttacataaaaacaacagctaatgcaactgttgatcatttg
agtaagtatttagcaatgcgattgacattagatcttggtcccgaacttccagaacgagct
ctcaattttttgatctatgttgcacccactgcagatcaatttgttcctctcagtggcaat
caatcacttcgaaatgtacacgataagtattggaaggttaacaagccgttggaaatgttt
tactcttttaattaa
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integrated database retrieval system
