KEGG   Aphis gossypii (cotton aphid): 114120117
Entry
114120117         CDS       T05869                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114120117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ags03041]
    114120117
Spliceosome [BR:ags03041]
 Complex B
  Other components
   Prp19-related factors
    114120117
 Complex C
    114120117
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 zf-CCCH_2 RRM_occluded zf-CCCH_4 zf-CCCH RRM_3 RRM_YTH1 Nup35_RRM_2 zf-CCCH_10 zf-CCCH_PARP12 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 114120117
NCBI-ProteinID: XP_027837726
LinkDB
Position
3:complement(29845768..29849097)
AA seq 381 aa
MSLSKTTNTYNRQNWEDSDFPIVCETCLGDSPYLRMAKEKYGKECEVCARPFTVFRWCPG
ARMRFKKTEICQTCARLRNACQTCLLDLEYGLPLQVRDAALKIKEQIPKSDVNKEYFVQN
MDSELAKMDEAGGKCQNASDVLAKMARKAPYYERNRPHICSFWVKGECRRGEECPYRHER
PTDPEDPLSNQNFKDRYYGVNDPVAEKMMNRASEMPKLEKPEDQTITTLYVGNLNDITTE
KDLRDVFYQYGEIRNITHVAHQNCAFIQYTTRAAAEMAAESTYGRLTLGGHKLNVRWGHA
QARKDKETTSIAAMKETKMKPSPGLPAPLPPLPTELQNNFFNIAPQTVPVVATPFIPVMP
TLPHPSMQYMSTPLYPPGTSK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcactttcaaagacgacaaacacgtataaccgacagaattgggaagattccgacttt
ccaattgtttgcgaaacatgtttaggagatagcccttacttgcgaatggcaaaagaaaaa
tatggcaaagagtgtgaagtttgtgcaagaccatttacagtattccgttggtgtccaggt
gccagaatgcgtttcaagaaaactgaaatatgtcaaacatgtgcacgtttaagaaatgct
tgccagacatgtttattggatcttgaatatggacttcctttacaagttcgtgatgctgca
ttaaaaattaaagaacagattcctaaatctgatgttaataaagaatattttgttcaaaat
atggattctgaattagccaagatggacgaagctggtggaaaatgtcagaatgctagtgat
gtattggctaaaatggctcgtaaagctccttattatgagcgtaacaggccacacatttgt
tcattttgggtgaaaggtgaatgtcgtcgaggagaagaatgtccatatcgtcatgaaaga
cctacagacccagaagatccattatcgaatcagaatttcaaagacagatattatggtgta
aatgatcctgttgccgagaaaatgatgaacagagccagtgaaatgccaaaactagaaaaa
ccagaggatcaaacaattacaacactttatgttggtaacctgaatgacataactacagaa
aaagatttgagggatgtattttatcaatatggagaaatccgaaacattactcatgtagct
catcagaattgtgcattcattcaatataccacacgagctgcagctgaaatggcagctgag
agcacttatggtcgtttaacattgggtggacataaattgaatgtacgttggggtcatgct
caagctcgtaaagataaagaaaccactagtatagcagctatgaaagaaactaaaatgaaa
ccttcaccaggattacctgccccattaccaccattgcccaccgagttacaaaacaatttt
ttcaacattgctcctcaaactgtgcctgttgttgctactcctttcatacctgtcatgcca
acattacctcacccgagtatgcagtacatgtcaacacccctttatccacctggcacaagc
aaataa

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