Aphis gossypii (cotton aphid): 114120228
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Entry
114120228 CDS
T05869
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114120228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114120228
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114120228
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
114120228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114120228
NCBI-ProteinID:
XP_027837876
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MSLVSLNEAEKVYIIHGVEENFRCDGRSRQDYRPLELEMDIVSNANGSARLRLANSDILV
CVKVEIDNPLPEAPKDGKVEYFVDCSANATPAFEGRGGEHLAAELSRFLSLAHSPVFNLS
KLCIVPGQSCWKLFVDVLILECGGNLFDAVSLAAKAALCNTSLPNIVGTYDDGQNIDLQI
SDDPFDTKPLDASDLSVLVSLCKIGNSYVADPTIEEEICGAGCIVVSVTPKGNVTAVLKK
GAGSFMPDTLNEIIMSGSHIGILLNKALNETLTQDMSSNVCKQQYGFLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggtatcattgaacgaggcggaaaaggtgtatattattcacggagtcgaggaa
aatttccgatgcgatggacgcagtcgacaagattacaggccgttggaattggaaatggat
attgtgagcaatgccaatgggtctgcacgcttgcgattagccaactccgatattttagtg
tgtgttaaagtcgaaattgacaacccacttccagaagcgcccaaagatggcaaagtagaa
tattttgttgattgttcagctaatgcaactccagcatttgaaggacgtggtggtgaacat
ttagctgcagaactcagtcgctttctttccttagctcatagcccagtatttaatttgagc
aaattgtgtattgttcctggacaatcatgttggaaattatttgttgatgttctgatatta
gaatgtggaggaaacttatttgatgccgtatcattggcagctaaagctgctttgtgtaac
acaagtttaccaaatattgtggggacatatgatgatggtcaaaatattgatctccagata
tctgatgatccatttgacacaaaaccattagatgcaagtgatttatccgtgctagtgtct
ttatgcaagattggcaacagttatgtggctgatccaactatagaggaagaaatatgtggt
gcaggatgtattgttgtgtccgttacacctaaaggtaatgtaacggccgtattaaagaaa
ggagctgggagttttatgccagatacgttaaatgagataattatgtctggttcacacatt
ggtattctgttgaacaaagcactcaatgaaactcttactcaagacatgtccagtaatgtt
tgtaagcaacaatatggtttcctcaaatga
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