Aphis gossypii (cotton aphid): 114120245
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Entry
114120245 CDS
T05869
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ags03041
]
114120245
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114120245
Spliceosome [BR:
ags03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
114120245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
114120245
NCBI-ProteinID:
XP_027837901
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All DBs
Position
1:complement(37694330..37699347)
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AA seq
880 aa
AA seq
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MPASEYSKDTDRTTDVQTHDETPFSDIVTDHPLILKGLSDCGFINASPIQVAALPTIIAG
NDTIVEAKNGTGKTLTFVIPTLIRLKLDQDHLQTIILAPTREIAVQIQQCFKKVGQHLPG
LKCEYFIGGTPVDVDKQKAKSCQIAVGSPGRIKHLLNEHVLKCSEVKSFILDEVDKLFTD
KCFTKDVRLIDTKLPKLKQTIVVSASIDKNDMSVFDEFMKEYIIVKGAEEDMNALQDPSK
FLLGIQQYVACVKAVSTNIILLPAKNVRLLNILKNLPFTQCIIFTNYMTRVEAVCNMLRD
HNYKADYIRGDQDQSIRLKLVDRLTSFKSKILVATDLIARGIDSSNVDLVINMDCPHDWA
TYLHRIGRAGRFGNKGNAFTILDDDKELKTFKHIINSIESIKVKMLPIAITKPILEYADN
ELEDLNLTTETEMLPIQDTENGITKENGNNLIEENLNKDNESDSIFSTNDIESNVSSLSE
KESLQKLCDLVKETEKKLIENNMVDKKHLTDDRSYVLFDPEPLLNSTDQYTKYSPEDLLD
IIKNYDSDFEKYEASKKLMLKNSTLQTVSENEPSNINQICENNDLKNLSNTTDIKMNNIN
TDQLLESQHKPLINIEDEKLVNEVCSESNISNESIIDDPKIDINNSQRLRFTDIYSLFQI
PDFSLLKPVQHDSEFAHLTDADESDVSTMMCEKSSKAEEFSEEEYCDEEESCDEEEYYDE
EEYCEEEECCDEEEYCEEEECCDEEECSDEEDSCNEEYCDEDKYHDKQENPNEKEYCDNK
KLYEEEIDLVAENKSFDERYTNKNCFYNHNNHGIHFEKDSCKSTQKPFCNNIQKYNFPKT
EEKNIEINDHQVVDYEILNDWYSQWKQQMNRIQTFVRMSK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtccgaatattctaaagacactgaccgaactactgacgtacaaacacacgat
gagacaccatttagcgacattgtaacagaccatccactcatattgaaaggtctgtccgat
tgtggtttcataaatgcttctcctatacaagttgctgctctaccaacaatcattgcagga
aatgatacaatagtggaagcaaaaaatggaactggaaagacattaacttttgttatacca
actttgattagactgaaattagatcaagatcatttacaaactattattttggcaccaaca
cgagaaatcgctgtccaaatacaacagtgtttcaaaaaagttggacagcacctgccagga
ctgaaatgtgaatatttcattggtggtactccagttgatgttgacaaacagaaggcgaaa
tcatgtcaaatagctgttggttctccaggacgcatcaaacacttactcaatgaacatgtg
ttaaaatgttcagaagtaaagagctttatacttgatgaagttgataaattatttactgac
aaatgttttacaaaagatgttcggctgatagatactaaacttccaaaattaaagcaaaca
atagttgtaagtgcttcaattgataaaaatgatatgtctgtttttgatgagttcatgaaa
gagtatattatagtcaagggagcagaagaagatatgaatgcattacaagacccgtcaaag
ttcctattaggtattcagcagtatgtagcatgtgttaaagcagtcagtactaatataata
ttattacctgcaaaaaatgtgcgacttcttaatatattaaaaaatttaccatttactcaa
tgtatcatattcactaactacatgacaagagttgaagctgtttgtaatatgctacgtgac
cataactataaagcggattatattagaggtgatcaagatcaaagtattcgattgaagtta
gtagatagattaacatcttttaaatcaaaaatacttgttgccacggatttgatagccaga
ggaatagattcgtcaaatgtagacttggtgattaatatggactgtccacatgattgggct
acatatctacatagaattggccgagctggaagatttggaaacaaaggaaatgcttttact
attttggatgatgacaaagagttgaaaacttttaaacatattattaatagtattgaaagt
attaaggttaaaatgttaccaatcgcaataacaaaacctatacttgaatatgcagacaac
gagcttgaagatcttaatttaactactgaaactgaaatgttaccaatccaagataccgaa
aatggaataactaaagaaaatggaaataatttaattgaagaaaacttaaataaggataat
gaaagtgattctatatttagtaccaatgatattgaatcaaatgttagcagtttatctgaa
aaggaatcactacaaaagctttgtgatcttgttaaagaaactgaaaaaaaactcattgaa
aataacatggttgataaaaaacatttaactgatgatagatcctatgtgttatttgatcca
gaacctttacttaatagcactgatcaatacacaaaatatagtcctgaagatcttttagat
attataaaaaactatgattcagattttgaaaaatatgaagctagtaaaaaactaatgtta
aaaaactctactctccaaactgttagtgaaaatgagccttctaatataaatcaaatatgt
gaaaataatgatttaaaaaatttatctaacactactgatattaaaatgaacaatataaat
acagatcagttgttggagagtcaacataaacctcttattaatattgaagacgagaagtta
gttaacgaagtatgttcagaaagcaatatttcaaatgaatcaattattgatgaccctaaa
attgatataaataatagtcaacgactacgattcacagacatttatagtttatttcaaata
ccagattttagccttttaaagccggtacagcatgatagtgaatttgctcatttaacagat
gcagatgagagtgatgtgtcaactatgatgtgtgaaaagagtagtaaagctgaagaattt
tcggaagaagaatactgcgacgaagaagaatcttgtgatgaagaagaatactacgatgaa
gaagaatactgcgaggaagaagaatgctgtgatgaagaagaatactgtgaggaagaagaa
tgttgtgatgaagaagaatgcagcgatgaagaagattcatgtaatgaagaatactgtgat
gaagacaaataccatgataaacaagaaaatcccaatgaaaaagaatattgtgataataaa
aaactatatgaggaggaaattgatttagtagcagaaaataaaagttttgatgaacgttat
acaaataaaaattgcttttataatcataacaaccatgggatacattttgagaaagatagc
tgtaaatctacacagaaaccgttttgcaataatatccaaaaatataattttcctaaaaca
gaagaaaaaaatattgaaattaatgatcatcaagtagtagattatgaaattttaaatgac
tggtatagccagtggaaacagcaaatgaatcgtatacagacatttgtcaggatgagtaag
tga
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