Aphis gossypii (cotton aphid): 114121132
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Entry
114121132 CDS
T05869
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03022
Basal transcription factors
ags03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114121132
09124 Replication and repair
03420 Nucleotide excision repair
114121132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114121132
03400 DNA repair and recombination proteins [BR:
ags03400
]
114121132
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114121132
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114121132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
114121132
NCBI-ProteinID:
XP_027839108
LinkDB
All DBs
Position
2:complement(74090363..74092470)
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AA seq
305 aa
AA seq
DB search
MQSETPKKIFSSLLVIILDVNPAQDTLLSGEIKLSSILSSVVAFANSHLMLRTHNKVAVL
ASDPNSCDFIYSDQDELDFKKKTVSSCKMGGSQYELFSHIDRSIKFNIVKFLKDAAEEPH
MSRDTVFGASCAKALCYINRLQSNLFPGETMNSRILIISGCDNEGDKYIRCMNTFFTAQK
QNVAIDVCSLTHDVTLLKQACYITEGSYFRMPKLEGLLLYLQWIFLTEPSSRKKLVIPLA
PQLDFRPFCFCHGTLTAIGFVCSLCLTIYCKISPICTTCEAVFKVRSAIAVKPKKKKIKT
TSVNN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagaaacaccaaagaaaattttttccagtcttctggtaataattcttgatgtt
aacccagctcaagatactttgcttagcggagaaataaaactatcgtccatacttagttcc
gttgttgcttttgctaattctcacttaatgcttcggacccataataaagttgctgtgctg
gcatctgacccaaatagctgtgatttcatatactccgatcaagatgaacttgatttcaaa
aagaaaacagtcagtagttgtaaaatgggtggaagtcaatacgaattgttcagtcacata
gatcgttcaatcaaatttaatatagtaaaattcctcaaggatgcagctgaagaaccacat
atgtctagagacaccgtctttggagcatcttgtgccaaggctttatgctatatcaataga
ttacaaagtaatctctttccgggcgaaacaatgaattcgagaatattaattatatctggt
tgtgataatgaaggagacaaatacatacgttgtatgaatacatttttcacagctcaaaaa
caaaatgtagctattgatgtatgtagtcttacccatgatgtcactctattaaaacaagca
tgttatatcacagaaggttcatattttcgtatgcctaaattagaaggattgttactatat
ttacaatggatatttttaacagaaccttcttctaggaaaaaattggttataccattagct
cctcagttagatttccgacctttttgtttttgtcatggaaccctaactgcaattggtttt
gtgtgttcattatgtttaactatttattgtaaaattagtcctatttgcacaacttgtgaa
gcagttttcaaagtacgatcagctattgcagtcaaacctaaaaagaagaaaattaaaact
acaagtgtaaataattaa
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