Aphis gossypii (cotton aphid): 114121136
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Entry
114121136 CDS
T05869
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags04137
Mitophagy - animal
ags04140
Autophagy - animal
ags04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114121136
04137 Mitophagy - animal
114121136
04148 Efferocytosis
114121136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ags03000
]
114121136
Transcription factors [BR:
ags03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114121136
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
PAS_4
HIF-1a_CTAD
PAS_2
DUF2160
Motif
Other DBs
NCBI-GeneID:
114121136
NCBI-ProteinID:
XP_027839111
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All DBs
Position
2:18224172..18269783
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AA seq
935 aa
AA seq
DB search
MENKKPKEKRRNSERRKEKSRDAARSRRSKETEIFTDLGSALPLPASVISQLDKATIMRL
TIASFKIMDALSSTNIDVKPDEKDCPPNISGICNKALDGIVLITTADGDIIFISENISSY
LGLSQIDLIGQSIYEFAHLCDQAELKDILTNKDIGEQKSFFVRMKCTLTNKGRNVNLKSA
SYKVLHFTGHSVINTCAKIKSSILSGGESDSDYESDKKTDSDSKSNNINLKFEKTDNDSP
SHIFVSIAEPIPHPANIEIPLYKQSKIFFSKHSLDMKYIIADDVITSYVGYEPDSLVAKS
VFDYYHAQDCNSVEKSFKILFEKGQVETDRYRFLSKGGGYVWIVTQATILNDHKGLKPES
IMCINYVISGVEHGDEIYSLCQLSPVVCKPAIQDKPSSPQKQKQQPQQQKQQPVTSAKKP
SSTEKVFKPKCLVDSSTFLLPAGNGPVYLDVNGDGKPRAVLQSVTSTASVIKKKPESCSE
SPKATTSKIFAPRTEDMNKGFLTFSDDDTGLTMLKDEPEDLTHLAPTAGDVCVPLDTCGL
GHLGLFMSDVLDDLILTDCSLAPFDSLPAAPSLHDAYSSASRSSPPMHHLHHHHLHHGGD
ELSQHAVTDLCDPTMSSLLGMDLDNSPNDLDLDLSLKNQFIPLYEDDLYPLLSDDLLWGS
GDRSPSPKPSPTATNHHDGSSRNNNWHVPTTEDIVGKNSMDRDAPPSPSLAKLLQKTDTD
ALPCRQQHFDSGGSLLHMDGGDSWGSISKMLHQRYNSGGSSGSEPTIATTDQRLGQHNPL
RQQQPQQQQQLDCNGSAAGGARANVGGVKRTGPNATAAATPSSWKRCRQEETAKQGASNS
VLMNLLVSGCDDDSGKTLVGKNSVVKNDSQPRHRSRLKAVSCLLDPGSTSIPSLMDLTAH
DYDVNAPAGGALLQGSELLKALEIGGGGGGNIAVA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaaaaacccaaagagaagcgaagaaattctgagagacgaaaagaaaaatca
agggatgcggctcgatctagacgtagtaaagaaactgagatatttacagatcttggatca
gcattacctttaccagcatccgttattagtcagttagataaagcaactattatgcgattg
actattgcatctttcaaaattatggacgctttatcatcaacaaatattgatgtaaaacct
gatgaaaaagattgtcctccaaacataagtggaatatgtaacaaagcattggatggcatt
gtattaattaccacggccgatggagatataatcttcatatcagaaaatatttccagctac
ttaggcttatcacagattgatttaatcggacaatcgatttatgagttcgctcatctttgc
gaccaagctgagttaaaagatattttaactaacaaagacattggtgaacaaaagtcgttt
tttgttcgaatgaaatgtactcttaccaataaagggcgcaatgttaatctgaaatcagca
tcatacaaggtgctgcattttacaggacattcagttatcaacacttgtgccaaaataaaa
tcatcaattttatcaggtggagaatctgattcagactacgaatcagataaaaaaacagat
tctgatagtaaatctaataatattaatttaaagtttgaaaaaactgataatgattctcca
tctcatatatttgtgtcgattgctgaaccaataccacatccagcaaatattgagatacca
ttgtataaacagagcaagatatttttcagcaagcattcattagatatgaaatatataatc
gctgatgatgttataacaagctatgttggttatgaaccagattcattggttgcaaaatct
gtgtttgattattatcatgctcaagattgtaattcggttgaaaaaagttttaaaatatta
ttcgagaaaggacaggtagagacagacagatatcgatttttgtcgaaaggaggtggctat
gtttggatagttacacaagcaactatactaaatgatcacaagggtttaaaaccagaaagc
attatgtgtattaattatgtaatcagtggcgtggaacacggcgacgagatctattcactg
tgccagctatcgccggtagtctgcaagcccgccatccaagacaaaccatcatcgccgcaa
aagcaaaagcaacagccacagcaacagaaacaacaacctgtaacttctgcgaaaaaaccg
tcgtccacggaaaaagtgtttaagcccaagtgtttggtggactcttccacgttcttgttg
ccggcaggcaatggaccagtttatctggacgtgaacggtgacggtaaaccgagagccgta
ttgcagtcggtcacatctaccgccagtgtcattaaaaagaagcctgaatcgtgctcggag
agcccgaaagccactacgtccaagattttcgccccgcgaaccgaagacatgaacaaggga
ttcctgacattttcggatgacgacacgggactaaccatgctcaaagatgaaccggaagac
ttgactcatctggccccgacggccggtgatgtgtgcgtgccgctggacacttgtggtctc
gggcatttgggcttgttcatgtccgacgtgcttgatgacctcatactcaccgactgttca
ttggcaccgtttgactcgttgcctgcagctccgtctctgcacgatgcgtactcttctgcc
tcccggtcttcgccgccaatgcaccacctacatcaccatcacctccaccacggcggcgac
gaactgtcgcagcacgctgtcaccgacttgtgcgatccgaccatgtcctcgctgctgggc
atggacctggacaatagtcccaatgacttggacctggacttatcgctcaagaatcagttc
atacccttatacgaagacgacctatatccactgctgtcggacgaccttctgtggggcagt
ggtgacaggtcgccttcgcccaaaccgtcgccgactgcgaccaatcaccacgacggcagc
agcagaaacaacaactggcatgtgccgacgacggaagatatcgtcgggaaaaactcgatg
gacagagatgcgccgccgtctccgagtctggccaagttgctgcagaaaaccgacacagat
gcactgccctgcagacaacagcattttgacagcggtggcagcctcctgcacatggacggc
ggtgactcatggggatcaatcagtaaaatgttacaccagcggtacaactcgggtggttcc
tctgggtctgaacctacgattgctacgacagatcagcgcctcggccaacataatccctta
cggcaacaacaaccacagcaacagcaacagttggattgtaacggatcggcagcaggaggt
gcccgagccaatgttggcggtgtcaagcgaactgggccgaatgccactgcagctgcgacc
ccgtcgtcgtggaaacggtgcagacaagaagaaacggctaaacagggtgcctctaacagc
gtgctgatgaacctgctggtcagcggttgtgatgatgactcgggaaaaacgttggttggc
aagaactctgtggtgaaaaatgattcgcagccgaggcaccggtcgagactaaaggccgtc
tcgtgcctgttggacccgggcagcacttccataccgtcgctgatggacctgaccgcacat
gactacgacgtgaacgctccggctggtggagctctactccaggggtcggaacttctgaag
gccctggaaatcggaggcggcgggggtggcaacatagccgtcgcatag
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