Aphis gossypii (cotton aphid): 114121602
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Entry
114121602 CDS
T05869
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03430
Mismatch repair
ags03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114121602
03460 Fanconi anemia pathway
114121602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ags03400
]
114121602
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114121602
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Kazal_C6
Motif
Other DBs
NCBI-GeneID:
114121602
NCBI-ProteinID:
XP_027839813
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Position
1:complement(35648679..35653543)
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AA seq
829 aa
AA seq
DB search
MSGQIKPINKLDVHKICSGQVVLNLATAVKELIENSLDAGATSVGIKLKEFGKDLIEVTD
NGAGVHPDNFEGLALKHHTSKIQDFADLTSVETFGFRGEALSSLCALSDVTVTTRHSSQE
CGIKLVFDHSGNIKLKVPIAKQIGTTVTLSNLFSSLPVRHKEFHRNLKKEFGKMIQVVTG
YCLVSTQVKLSCVNQTKSSNNVLLSTHGSNTVLENISCIYGSKQANSLLVIKKVIPVDEV
DDTSNIFELDGYISSCDHSGGRSSKDRQFYFINSRPCEPLKIIKTVNEVYHQYNQNQYPF
VYLNITIARAEVDINVTPDKRQIFLSNENCLVSIIKASLNRLFENIPSTYKINTSLYESI
STKRPYESTTEMKNCKLLKLDVSNEYVRKETPSHSEQIKAKLNRWKSNNSKIAAVPETID
TFFKPKIEHIDNVQKKIVEELLDSKVEELTENNVCNSPLKCTDTIETNSKDENTDGQKQE
NIKSDKKNYTFINNSKSKNIELTECSFNNSNFENTDDNKFCLNNVSDKSDTEVDIKYDSI
KMREVKNVSLEDDINIYYDSSKIKTDVSIEIDTSVAPKERKFAVVETNLEIIKQRLRNLR
FRTSEKQKSKTRFYATIDPSKNQQAEGELSREISKDMFSKMSIIGQFNLGFIITKLDADL
FIVDQHATDEKYNFETLQNTTKITSQKLVVPQQLELTAVNEMVLMENINVFQMNGFDFQF
QQDGEPTKKVKLTKIPMSNNWSFGKEDVDELLFMLQDAPNTLCRPSRVRSMFASRACRKS
VMIGTVLNLSDMRKLIDHMGDIEQPWNCPHGRPTMRHLVNLSLLNVNRE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcaaatcaagccaataaataaattggatgttcacaaaatatgctctggtcag
gttgtattgaacttggctacagctgtaaaggagttaatagaaaacagtttagatgctgga
gccacttcagttggaattaaactaaaagaatttggaaaagatttgatagaagtaacagat
aatggagctggtgttcatccagacaattttgaaggacttgctttaaaacaccatacttct
aaaattcaagactttgctgatttgacttcagtagaaacatttggttttcggggagaagcg
ttaagctcattatgtgctttaagtgatgtaacagtgaccactagacattcatcacaagag
tgtggaattaaattagtgtttgatcattcaggaaacattaaactgaaagtccctattgct
aagcaaattggaacaactgttactttatctaatttattttcttcattacctgtaagacat
aaagagttccatcgaaatttaaaaaaagaatttggaaaaatgattcaagtagtgactggt
tattgtttagtttctactcaagtgaaattatcgtgtgttaatcaaacaaaatcttcgaat
aatgttcttctatcaacacatggtagcaacacagtattagaaaacatatcatgcatttat
ggttctaaacaggccaacagcttgttagttataaaaaaagtcattcctgtagatgaagta
gatgacacatcaaatatttttgaactagatggttatatatctagttgtgatcatagtgga
ggcagaagttccaaggacagacaattttatttcattaattcaagaccatgtgaaccttta
aaaattataaaaacagttaatgaagtttaccaccaatacaatcaaaaccaatatccattt
gtatacttaaatataacaattgcaagagctgaagtagacattaatgtaacacctgataaa
agacaaatatttttgtctaatgaaaattgcttggtttcaataattaaagccagtttaaat
agattatttgaaaatattccatctacttacaagattaatacatcattgtatgaatcaata
tcgactaaaagaccatatgaatcaactacagaaatgaaaaattgtaaattactgaagttg
gatgtaagtaatgaatatgtaagaaaagaaacacctagtcattcagaacaaattaaagct
aaattaaacagatggaaatctaataattctaaaatagcagcagttcctgaaactatagat
acattttttaaaccaaaaattgaacatattgataatgttcaaaaaaaaattgttgaggaa
ttattagacagtaaggttgaggaattaacagaaaataatgtttgcaacagtccgttaaag
tgtactgatactattgaaaccaatagcaaagatgaaaatactgatggacagaaacaagaa
aatattaaaagtgataaaaaaaattacacatttattaataattcaaaaagtaaaaatatt
gaattaactgaatgttcttttaataattcaaattttgaaaatacagatgataataaattt
tgtttaaataatgtatctgataaatctgatactgaagtagatattaaatacgattcgatt
aaaatgagggaagttaaaaatgtatctcttgaagatgatatcaatatttattatgattcg
tcaaaaataaaaactgatgttagtatagaaatagacacttctgtagcgcccaaggaaaga
aaatttgcagtagtcgaaactaaccttgaaataattaaacaaaggttgagaaacttaaga
tttcgaacatctgaaaaacagaaatcaaaaacaagattttatgctactattgatccaagt
aaaaatcaacaagctgaaggtgaattgagtagagaaatttctaaagatatgttttctaag
atgagtattattggtcaatttaatttgggtttcatcattactaaacttgatgctgatcta
tttatagttgatcaacatgccacagatgaaaaatataactttgaaacattacaaaataca
actaaaatcacaagccaaaaattagtggtacctcagcagttagagttaactgcagttaat
gaaatggtattaatggaaaatattaatgtttttcaaatgaatggatttgattttcagttc
caacaagatggtgaaccaacaaaaaaagttaagttaactaagattccaatgagtaataat
tggagttttggtaaggaggatgttgatgaacttttgttcatgttacaagatgcaccaaat
actctctgtagaccttcaagagttcgttcaatgtttgcttctcgcgcttgtcgtaagtct
gttatgattggcacagtattaaatttaagtgatatgagaaaacttattgatcacatggga
gatattgaacaaccttggaattgcccgcatggaagaccaacaatgagacatttagttaac
ctttcattattaaacgttaatagagaatga
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