Aphis gossypii (cotton aphid): 114122085
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Entry
114122085 CDS
T05869
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03030
DNA replication
ags03410
Base excision repair
ags03420
Nucleotide excision repair
ags03430
Mismatch repair
ags03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114122085
03410 Base excision repair
114122085
03420 Nucleotide excision repair
114122085
03430 Mismatch repair
114122085
03440 Homologous recombination
114122085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ags03032
]
114122085
03400 DNA repair and recombination proteins [BR:
ags03400
]
114122085
Enzymes [BR:
ags01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114122085
DNA replication proteins [BR:
ags03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
114122085
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
114122085
MMR (mismatch excision repair)
DNA polymerase delta complex
114122085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
114122085
NCBI-ProteinID:
XP_027840444
LinkDB
All DBs
Position
3:complement(36837614..36844687)
Genome browser
AA seq
1090 aa
AA seq
DB search
MFNKKRPNSSDKQGSFSKKFKVEDDEQSMFENDLAIMEEMDKELDDSPDLLGEGPDQEDS
SALWSRPAIKEINPVAESLAFQQLTIDNYIGEPIKGMSGAQTGLVPITRMFGITMDGNSV
CCNVHGYSPYFYTNAPEGFGPEHCKEFKTRLNAIVLSDMRGNQNRVQEPVLMVEIVKKIN
LYGYHGEELEKYLKITMALPKLVPAAKRLLEKETVLPAFSGHNYRMFETNVDYDMRFMVD
LKIVGCSWIELPAGTYTIRDSKSRLKGQSRCQFEVDVGWEKLIAHAPEGEWSKVAPFRIL
SFDIECAGRKGIFPEADKDPVIQIANMVQIENKRLIRNVFTLNTCAPIVGSQVISCEKEN
NMLEKWAAFVRECDPDIITGYNINNFDLPYLLNRAKHLHTKNFNFLGRIKDIQSVIREQV
IQSKQMGRRENKSINIDGRVPFDLYLVLVRDYKLRSYSLNSVSYHFLQEQKEDVHHSIIT
DLQNGTPQTRRRLAVYCLKDAFLPLKLLDKLMCLINYMEMARVTGVPLGSLLTGGQQAKV
VSQLLRLAQEKNYIMPTMAGGMQDEQFEGATVIEPIKGYYADPIATLDFTSLYPSIMMAH
NLCYTTLLTQKTINLLNLSESDYTKTPSGSYFLSKTIRKGLLPEILENLLSARKKAKTDL
KSETDPFKIKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISTSVTSYGRMMIERTKQE
VEQKYCIANGYEHDAIVIYGDTDSVMVKFGVKSIEKAMELGREAAEYVTTKFINPIKLDF
EKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNSPLVSNMINTCLQKLLIDR
DPDGAVAYAKEVISDLLCNRIDISQLVITKELTKNDYTAKQAHVELSIKMKKRDPGNAPK
LGDRIPYILITGTKGTPAYQRAEDPIFVLENNIPIDFNYYLENQLSKPLVRIFSPILGDK
AESVLLKGDHTRKKAMVTSKVSALSAFTKKKEVCLGCKSVLPTNEEKNALCKYCLPKQGE
LYYQERVKVNDLQEKFCRLWTECQRCQGSLHEEVICTSRDCPIFYLRKKIQIDLTAQVKT
MDRFGNPNNK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagaaaagaccaaattcgtcagataagcaaggcagttttagtaaaaaattt
aaagttgaagatgatgaacaatcaatgtttgaaaatgatcttgctattatggaagaaatg
gataaagaacttgatgattcaccagatcttttgggtgaaggtcctgaccaagaagactcc
agtgctttgtggagtagacctgcgataaaagaaatcaatccagttgctgagagtttagct
tttcaacaacttactattgataattatattggagaaccaataaagggaatgagtggtgca
caaactggtttagttcccattactcgaatgtttggtattaccatggatggtaattctgta
tgctgtaatgtgcatgggtattctccatacttttacaccaacgctcctgaaggatttggt
cccgaacattgtaaagagtttaaaactcgtttaaacgcaatagttttaagtgatatgcgt
ggaaatcaaaatagagtgcaggaacctgttcttatggttgaaatagttaaaaaaataaac
ctttatggttatcacggtgaagaattagaaaaatatttaaaaataactatggctttacca
aaattggtacctgcagcaaaacgacttctggaaaaagaaacagtgttgcctgcattttct
ggacataattatagaatgtttgaaactaatgttgattatgatatgcgatttatggtagat
ttaaaaattgttggttgtagctggattgaacttcctgcaggcacttatacaatacgtgat
tctaaatcaagacttaaaggacaatctagatgtcaatttgaagtagatgttggttgggaa
aaattaatagctcatgctcccgagggtgaatggagtaaagttgcaccttttcgaattctc
agttttgatattgaatgtgctggccgtaaaggtatatttcctgaagcagataaagatcct
gttatacaaatagctaatatggtacaaatagaaaataaaagattaattagaaatgtgttt
actttaaatacatgtgcacccatagtaggtagtcaagttataagttgtgaaaaagaaaat
aatatgcttgaaaaatgggctgcatttgttcgagaatgcgatcctgacattattactggt
tataacattaataattttgatttaccttatttgctaaatcgtgcaaaacatttgcatact
aaaaatttcaattttttgggacgtatcaaagatatacaatctgttataagagaacaagtt
attcaaagtaaacaaatgggccgaagagaaaataaaagtattaatattgatggaagagtt
ccttttgatttatatttagtattagtgcgagattataagttacgttcatattcattaaac
tctgttagttatcactttttacaagaacaaaaagaagatgttcatcacagtattataaca
gatctacaaaatggcacaccacaaacaagacgtcgtctagcagtttactgtttaaaagat
gcattccttccattgaaattattagataaacttatgtgcttgattaattacatggaaatg
gccagagtaactggtgttccattgggaagtcttttaactggaggtcagcaagctaaagtt
gtatctcaattacttcgtcttgcacaggaaaaaaattatataatgcctacaatggctggt
ggaatgcaagatgaacaatttgaaggagcgaccgtgatagaacctattaaaggttattat
gctgatccaattgcaacattggatttcacttccttgtatccaagtattatgatggctcat
aatttatgctatactacattgttgactcaaaaaacaataaatcttttaaacttgtctgaa
agtgattatactaagactccttctggtagttactttttgtctaaaaccatacgaaaggga
ctattaccagaaattttagaaaatttattatctgcacgtaagaaagcaaaaacagattta
aaatctgagactgatcctttcaaaataaaagtcttagatggtcggcaattggctttaaaa
attagtgcaaattcagtatatggctttactggagctcaagtaggaaagttaccatgttta
gaaatatcgacaagtgttacctcttatggtcgaatgatgattgaacgtactaaacaagag
gttgaacaaaaatattgcatagcaaatggttatgaacatgacgctatagttatttatgga
gacaccgattctgtcatggtaaaatttggagttaagtctattgagaaagcaatggaattg
ggacgtgaagcagctgaatatgtaacaacaaaatttataaatcctataaaattagatttt
gaaaaagtttattttccttatttattaattaataaaaaacgttatgctggcctttatttt
acacggcctgacaagtatgacaagatggactgtaagggattggagacagtacgcagagat
aattcaccattagtatctaacatgattaacacctgtttgcaaaaattgcttattgataga
gatcctgatggtgcagttgcctatgcaaaagaagttattagtgatttgttatgcaatcga
attgacatatcacagttggtaattacaaaggagttgactaaaaatgattatacagcaaaa
caagctcatgtagagttatcaataaagatgaaaaaaagagatcctggaaacgcaccaaag
ttaggtgaccgtataccatatattctaattacaggcaccaagggtacaccagcatatcaa
cgagcagaagatccaatatttgttttggaaaacaatatacctattgattttaactattat
ttagaaaatcaactgtccaagcctttagttcgaattttttctcctattctcggggacaaa
gcagaatctgttttattgaaaggtgatcatacacgaaaaaaagctatggtaacatctaaa
gtgagtgcattatcagcattcacaaaaaaaaaagaagtctgtcttgggtgtaaaagtgtt
ttgcctactaacgaggagaaaaatgctttatgtaaatattgtttgcccaaacaaggtgag
ttatattatcaagaacgtgttaaagtgaatgatctacaagagaaattttgccggttatgg
actgaatgtcaacgttgtcagggaagtttacatgaagaagtcatttgtactagtcgagat
tgtccaatattttatttaaggaaaaaaattcaaattgacttaactgctcaggtgaaaaca
atggatcgatttggcaacccaaataataaatag
DBGET
integrated database retrieval system
