KEGG   Aphis gossypii (cotton aphid): 114122182
Entry
114122182         CDS       T05869                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03082  ATP-dependent chromatin remodeling
ags03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114122182
   03083 Polycomb repressive complex
    114122182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ags03036]
    114122182
Chromosome and associated proteins [BR:ags03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     114122182
  Histone modification proteins
   HAT complexes
    HATB complex
     114122182
   HDAC complexes
    Sin3A-HDAC complex
     114122182
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     114122182
    PRC2.2
     114122182
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     114122182
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114122182
  Chromatin remodeling factors
   NuRD complex
    114122182
   NuRF complex
    114122182
   NuRF complex (fruit fly)
    114122182
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF12 ANAPC4_WD40 eIF2A Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 114122182
NCBI-ProteinID: XP_027840570
LinkDB
Position
1:complement(12238406..12241568)
AA seq 427 aa
MGDKEGDTFDEAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
EYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDSSHYDGEKQEYGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECQPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVVEAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRANNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSPEDA
DDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDASSP
EVDAPVP
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgggtgacaaggaaggtgatacgttcgatgaggctgtcgaggagcgtgtcatcaatgaa
gaatacaagatatggaagaagaacacaccgttcttgtacgacttggtcatgactcacgct
cttgagtggccttcgctcactgctcaatggctcccggacgttactcgcccggaaggtaaa
gagtattctattcatcgtttaatacttggtactcatacctcagatgaacagaatcattta
ttaattgctagtgttcagttaccaaatgaagatgctcaatttgattcttctcattacgat
ggagaaaaacaagaatatggtggatttggttctgtaagtggtaaaattgaaattgaaatt
aaaattaaccatgaaggtgaggttaaccgtgctcgttacatgcctcaaaatccatgtgtg
attgctaccaaaacaccatcaagcgacgtattagtatttgattataccaaacatccatca
aagcctgatccaaatggagaatgtcaaccggatttaagattaagaggtcatcaaaaagaa
ggatatggcttatcatggaatcctaacttaaacggatatttgttaagtgcatctgacgat
cataccatatgtctgtgggatattaatgctactcccaaagaacatagagttgttgaagct
aaaacaatatttactggacataccgctgttgttgaagatgtcgcttggcatttattacat
gaatcattatttggttctgttgctgatgatcaaaaactcatgatttgggatacacgtgcc
aacaatactagcaaaccatcacacactgttgatgctcatactgctgaagttaactgttta
tcatttaatccatactcagaattcattttagctactggaagtgctgataaaactgtagcc
ttatgggatttaagaaatctaaaattgaagttgcattcctttgaatcacataaagatgaa
atattccaagtacaatggtcaccacataatgagactatattagcatctagtggtacagat
agacgtttacatgtttgggatttgagtaaaattggtgaagaacagtcaccagaagatgcc
gatgatggcccccctgaacttttgttcatccatggtggccatactgctaaaatatcagac
ttttcttggaatcccaatgagccgtgggttatatgttcagtttctgaggataatattatg
caggtatggcaaatggctgaaaatatttataatgatgaagaaccagacgctagcagtcct
gaagtagacgcacctgttccttaa

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