KEGG   Aphis gossypii (cotton aphid): 114122298
Entry
114122298         CDS       T05869                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03030  DNA replication
ags03410  Base excision repair
ags03420  Nucleotide excision repair
ags03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114122298
   03410 Base excision repair
    114122298
   03420 Nucleotide excision repair
    114122298
   03430 Mismatch repair
    114122298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ags03032]
    114122298
   03036 Chromosome and associated proteins [BR:ags03036]
    114122298
   03400 DNA repair and recombination proteins [BR:ags03400]
    114122298
DNA replication proteins [BR:ags03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    114122298
  DNA Replication Termination Factors
   ELG1-RFC complex
    114122298
Chromosome and associated proteins [BR:ags03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    114122298
DNA repair and recombination proteins [BR:ags03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     114122298
  Check point factors
   HRAD17(Rad24)-RFC complex
    114122298
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_14 Rad17 AAA_16 AAA_24 Viral_helicase1 Mg_chelatase AAA_18 AAA_5 MeaB AAA_11 nSTAND3 AAA_19 AAA_28 AAA_assoc_2 NTPase_1 ABC_tran ResIII RNA_helicase CbiA AAA_29 IstB_IS21 DNAX_ATPase_lid AAA_7 AAA_30 RuvB_N MCM AAA_25 SRP54 AAA_2 TerL_ATPase MipZ AAA_3
Other DBs
NCBI-GeneID: 114122298
NCBI-ProteinID: XP_027840716
LinkDB
Position
1:complement(47437891..47440435)
AA seq 363 aa
MEVDNTEETASTTTVIDPMEGSSTSKNDEGTTITPQTKTVKSDLNMPWIEKYRPKSFSDI
VGNEETVLRLEKFSSCGNVPNIIIAGPPGVGKTTTILALARILLGSAFKEAVLELNASSD
RGIETVRNKIKMFAQQKVTLPPGRHKIIILDEADSMTDGAQQALRRTMELWSNTTRFALA
CNNSDKIIEAIQSRCAMLRYGKLSDQEVMTQILKVCKSEEVSFSSDGLEAVVFTAQGDMR
QALNNLQSTWNGFRHVDSANVFKVCDEPHPLLVKEMLLECADQNISKAYKIMAHLWKLGY
APEDIITNIFRVAKHLEIKESLKLKFIQEIGMVHIRIVEGMNSLLQLSGLLAKLCTAAAI
TVN
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggaagtcgataacacagaagaaactgcctcaactacgaccgtaatagatcccatggaa
ggatcgtcgaccagcaaaaacgacgaaggtactaccataactcctcaaacaaaaactgtt
aaaagtgacttaaatatgccatggattgaaaaatatcgtccaaaatcattttcagacatt
gtgggaaatgaagaaaccgtcttgcgactagaaaagttttcttcgtgcggaaacgtacca
aacataattattgctggtcctcctggtgttggtaaaacaacaacgatattggctctggct
agaatacttctcggtagtgcatttaaagaagctgtattagagttaaatgcgtccagtgac
cgtggtattgaaactgtaagaaataaaatcaaaatgtttgcccaacaaaaagttacattg
cctcctggtagacataaaataattattttggacgaagccgacagtatgactgatggagct
caacaagcacttagacgtactatggaattatggagtaatacaacaaggtttgcactagcc
tgtaacaatagtgacaaaattattgaagcaattcagtcacgttgtgccatgttacggtat
ggaaagctttctgatcaagaagttatgacacagattcttaaagtttgcaaatctgaagaa
gtatcgttcagttccgacggtttagaagctgttgtatttactgcccaaggtgacatgcga
caagcattgaacaacttgcaatcaacatggaatggttttagacacgtcgatagcgcaaat
gtatttaaagtgtgtgatgagccacatcccctacttgtcaaagaaatgttattggaatgt
gctgaccaaaatatctcaaaggcgtacaaaataatggcccatttatggaaacttggttat
gcccctgaagacattattaccaacatatttagagttgctaaacatttagaaatcaaggaa
tctctgaaattaaaatttatacaggagattggaatggttcacattaggattgttgaagga
atgaattcactacttcaactatcaggattattagctaagttatgtacagcagcagccata
acagtaaattaa

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