Aphis gossypii (cotton aphid): 114122410
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Entry
114122410 CDS
T05869
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114122410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114122410
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114122410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114122410
NCBI-ProteinID:
XP_027840866
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All DBs
Position
2:37905708..37908513
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AA seq
267 aa
AA seq
DB search
MNSIKKNIQDTYTKEYLALNKRNDGRQLMDFRDASLNLNTIHTADGSAAVKIGNTAVICG
IKAELGVPKSETPDIGYLLVNVELPSLCSKKIRPGIPCDEAMQITSFLNEVCNNCKILDL
QQLCISVDKLVWVLSCDIYCLNYDGSVLDACLIALLSALQTVKIPEVKYDKETEETNVIE
NYIPLKINSLPVSSTFGVFNEKYILADPTEEEEQLCVSKLTVVTNGSLLFSLHKPGGEFI
KDGQIQNCIRQAQNRTKTIHKLIKAAQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgatcaaaaaaaatatacaagacacttacacaaaggaatacctggcgcttaat
aaaagaaatgatggtagacaattaatggactttcgagatgcatctctaaatttgaatact
atacacactgcagatggatcggcagcagtcaaaattggtaatacggctgtcatttgtggc
attaaagcagaactaggtgttcctaaatctgaaactccggatattggatatcttttagta
aatgttgaactaccaagcctatgctctaaaaaaattcgacctggaattccatgtgatgaa
gcaatgcaaattactagtttccttaacgaagtgtgtaataattgcaaaatactagatttg
caacaattgtgtatttctgtagataaattagtatgggtcttgtcgtgtgatatttattgt
ttgaactatgatgggtctgttttagatgcatgtttaatagccttgttgtcagcattacaa
acagttaaaataccagaagtaaaatatgacaaagaaactgaagaaacaaatgtcattgag
aattacattccgttaaaaatcaacagtttaccagtatcatcaacttttggagtctttaat
gaaaaatatattttagctgatccaactgaagaagaagagcaactatgtgttagtaaattg
acagttgtgaccaatggttccttattattttcattacacaaacctggaggagaattcata
aaagatggccaaattcaaaattgtattagacaagctcaaaacagaactaagacaattcat
aaattaataaaagctgcacaataa
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