Aphis gossypii (cotton aphid): 114123048
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Entry
114123048 CDS
T05869
Name
(RefSeq) collagen alpha-1(III) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags04512
ECM-receptor interaction
ags04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114123048
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114123048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ags04147
]
114123048
00536 Glycosaminoglycan binding proteins [BR:
ags00536
]
114123048
Exosome [BR:
ags04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114123048
Glycosaminoglycan binding proteins [BR:
ags00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114123048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Chitin_bind_4
Motif
Other DBs
NCBI-GeneID:
114123048
NCBI-ProteinID:
XP_027841698
LinkDB
All DBs
Position
Unknown
AA seq
1471 aa
AA seq
DB search
MRLQRNGKMILKPRTNMYLILFFAIVGVQFALSQQTNPNDLEVVLNIEDSNKTQYHEQNF
DTMAYIFGYEVGPNGQFHHENKGPDGFTYGCYGYVDPEGKLQATHYISDGWGYRVVTPGE
SVEIFHHKHDPADENQANESSEGGSEHEHHGHHGVVTAWGDLYFPKGCGGGRPIQGTGQL
GGSGSSGYPSFIGVGQPGPAGAPGPSGSPGSAGSPGYPGSLGYPGKPGSPGSPGSPGSPG
SPGSPGSPGSLGYPGSGGSNGYPGSPGSPGSFGKPGYPGSPGSPGAPGSPGAPGSPGSPG
SLGYPGSGSPGSSGSPGLPGAPGSPGSPGSPGSPGSPGSLGYPGSGSPGSPGAPGSPGSP
GSLGYPGSGSPGSPGAPGSPGSPGAPGAPGSPGSLGYPGSGGYPGSPGSPGTFGKPGSPG
SPGSPGAPGSPGSLGYPGSGSPGSSGSPGLPGAPGSPGSPGSLGYPSSGSPGSPGSPGLP
GAPGSPGSPGYPGSLGYPGSGVPGSFGYPGSQGSPGSPGAPGSPGSPGSPGSPGSFGYPG
SGSPGTPGAFGKPGYPGSPGSPGSPGSPGSPGAPGSTGSQVYPGSFGYPGSQGSPGSPGA
PGSPGSPGSGYPGSLGYPGSPGSPGSPGSPGLPGSPGYPGTLGYPGSVSSGSFGYPGSQG
SPGAPGSPGTPGIPGTPGSSGSIGYPSGYPVSSGTPGTPGSPGLPGTPGLPGKPGSGLPG
SPSTVYPSYPGSPGSPGLPGTPGSPGKPGSSGYPSYQKPSPYPPSSYPSAPGSSGLPGTP
GIPGAPGLPGSPGLPGSSYNKPSTYPSVSGSPGLPGQPGTPGTPGSAYPGSTLNQKPNYQ
SVKPSSQGYPGSSYPGSPGQPGTPGLPGQPGTPGIPSYQKPNPPTTYPAQPTYPSQPSYS
GYPGSAGQPGKPGTPGTPGTPGLPAGPSYPKPTPPAGYPGSPGKPGQPGTPGLPGLPAQS
FGQNPQTFVDYGKPNLSSGYPGSPGQPGLPGQPGTPGTPGTPGFPSSYPSSPKPSPSPIN
PGSGSVTGSPSNGYPSSVEQTQTGYPNKPSSQPSYTGQNYVYPTSYPQKPNVPDYGAQQP
NVYPEYLSSGYPVPPPNAPLPNYPQPNAPSGYPSFYELYPGQNQIYPGQPDFNVYPSVAG
DQYPFNGNVYGYPEQQFTYPATEIKGDKPQVTTPVSIQTSGYKSKSSQTFPEYTSKPSLI
DIRINVPNVPDSNDGQKAVILGKNDLTGPSSGSSGYSSSLTPQYVDSPTKAPKLPYQFSQ
ESNQIILSSSKPETSTPLYSISTKTASKPENTNSVESSSTVSYEEQFSTLSPDSSTPVNI
IPYPLPIVPNPGSCPCYFVPPTSNSTNQLQQQPTFDLNNLPEGAVIGFVPVVFYPSCGAG
SATSKEVVSSKLNPVFPSAYQVPYKCSYCEQSESQTATIRGSFDQVVKQSQLNPSVVIKS
PSRNNYPNAPIYDQQEFGRKIKVVRRKTKDE
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgcaacgaaacggcaagatgattctgaaaccgcgtacaaacatgtatttaata
ctgttttttgcaatcgtgggagttcagtttgccttatctcagcaaactaacccaaatgat
ttggaagtggtacttaacattgaagatagcaacaaaactcaatatcatgagcaaaatttc
gataccatggcctatatattcggctatgaagtaggtccaaatggtcaattccatcatgaa
aacaaaggcccggatggattcacatatggttgttatggatatgtagatccagaaggaaaa
ttacaagcaactcattatatatctgatggctggggatacagagtagttacacctggcgaa
tctgttgaaattttccatcataaacatgatcctgctgatgaaaatcaagctaatgaaagt
tctgaaggtggttctgagcatgaacatcatggacaccatggagtggttacagcatggggt
gatctttatttcccgaaaggatgtggaggaggacgaccaattcaaggtactggtcaatta
ggtggatcaggttcatcaggataccctagctttattggagttggtcaaccaggaccagca
ggtgcacctggaccttctggatcaccaggttctgctggttctccaggataccctggttcg
ttaggatatccaggtaaaccaggatcaccaggctcaccaggctcaccaggatcccccggc
tctccaggatcaccagggtcccctggttctttaggctatcctggatcaggtggttctaat
ggatatcctggttcaccgggttccccaggttcatttggtaaaccgggatacccaggctca
ccaggatcaccaggcgcaccaggatcaccaggcgcaccaggatcaccaggttcaccagga
tcacttggttacccaggttcaggatctccaggatcatcaggatctcctggattaccaggc
gcaccaggatctccaggatcaccaggatcaccaggatctccaggatcaccaggatctctt
ggttatccaggatcaggatctccaggatcaccaggtgcaccaggctcaccaggatcacca
ggatcacttggttaccccggatcaggatcgccaggctcaccaggagcaccaggctctcca
ggctcaccaggagcaccgggagcacctggatctccaggttctttaggatatcctggatca
ggtggttatccgggttcaccgggctcccctggtacttttggtaaaccaggatcgccaggc
tcaccaggatcaccaggcgcaccaggatcaccaggatcacttggttacccaggttcagga
tctccaggatcatcaggatctcctggattaccaggagcaccaggatcaccaggttcacca
ggatcacttggttacccaagctcaggatctccaggatcaccaggatctcctggattacca
ggcgctccaggttcaccaggctcaccaggatacccaggatcacttggctatccaggatca
ggggttccaggatcatttggctatccaggctcacaaggatctcccggctcaccaggggca
ccgggctcaccaggatctccaggttcaccaggatcacctggttcattcggatatcctgga
tcaggttctccgggaacacctggtgcatttggtaaaccaggataccctggctcaccagga
tctccaggatcaccaggatctccaggctcaccaggagctccaggctcaacaggatcacaa
gtctacccaggatcatttggttacccaggctcacaaggatctcctggttcaccaggagca
ccaggatctccaggatcaccaggatcaggatatccaggatcacttggctacccaggctca
ccaggatcaccgggctcaccaggatcaccaggattgccaggatctccaggatatccagga
acacttggctacccaggatcagtatcatcaggatcatttggctatccaggctcacaagga
tctccaggagctccaggctcacctggaactccaggaatacccggaactccaggttcttct
ggatcaataggttacccaagtggttatccagtatcatcaggaactcccggaacacctgga
tccccaggattaccaggaactcccggattaccaggtaaaccaggttcaggattaccggga
agtccatctacagtgtatccaagttatccaggttctccgggttctccaggattacccgga
actccaggctcaccaggtaaacctggatcttcaggctatccatcatatcaaaaaccatca
ccttaccctccgtcgtcttatcctagtgcaccaggctcatcaggtttaccaggaactcca
ggaattccaggagccccaggattgccaggttcaccaggtttaccaggatcgtcgtataac
aaaccatctacttacccaagtgtttcaggatcaccaggattaccaggtcaaccaggtaca
cctggaacaccaggctcagcttatccaggttccacgttgaatcaaaaacctaattatcaa
tctgttaaaccaagctcacagggttatccaggttcttcatatccaggaagtccaggacaa
ccaggcactccaggattaccaggtcaaccaggaactccaggtataccttcataccaaaaa
ccaaatcccccaacaacatatccagctcaacctacatacccatcacagccatcttattct
ggttatcccggaagcgcaggtcaaccaggaaaaccaggtacgcctggtactccaggtaca
ccaggacttcccgcgggaccatcctacccaaaacctacacctcctgccggatatccaggt
tctcctggtaaaccagggcaaccaggaacccctggtctcccaggcttaccagcccaatcg
tttggacaaaatcctcaaacgtttgtcgattatggaaaacctaatctatcatcaggatat
ccaggatctccagggcaaccaggccttcctggtcaaccaggtactccaggaaccccagga
actccaggattcccaagttcttatcccagttcaccaaaacctagtccatctcccataaat
ccaggcagtggaagtgtaacaggttcaccatctaatggttatccatcatcagttgaacaa
actcaaactggttatccaaataaacctagttctcaaccatcatacacgggtcaaaattat
gtttatcctaccagctatcctcaaaagccaaatgttcctgactatggtgctcagcaacca
aatgtgtatccagaatatttaagttcaggatatccagtacctcctcctaacgcgccactc
cctaattacccacaacctaatgcaccatctggttaccctagtttttatgaattgtatcct
ggtcaaaatcaaatatatcccggccaaccagattttaatgtatacccatctgtagctggt
gatcaatatcctttcaatggaaacgtttatggttatcctgaacaacagtttacataccca
gcaacagaaattaaaggtgataaacctcaagtaacaacacctgtttctattcaaacatct
ggttataagagtaagtctagtcaaacttttccggaatatacaagtaaacctagtttgata
gatatacgcataaatgttccaaatgtacccgattccaacgatggccaaaaagctgtaatt
ttaggtaaaaatgacttaacaggaccatcttcaggatcatcaggatattccagctcactt
actccacaatacgttgacagccctacgaaagcgcccaaattaccatatcaatttagtcaa
gaatcaaatcaaattattttatcatcaagtaaaccagaaactagcactccgttgtatagt
atatctactaaaacagcatctaaacctgaaaatactaattcagtggaatcaagtagcaca
gtatcctatgaagaacaatttagtaccctttcaccagattcttcgacaccggtcaatata
attccttatcccttaccaatagtgccaaacccaggatcttgtccatgctattttgttcca
cctacaagtaattctaccaatcaattacagcaacaaccaacatttgacttaaataattta
ccggagggcgctgttattggattcgtgccggtagtgttttatccatcttgcggtgcaggt
agtgcaacatcaaaagaagtggtatcatcaaagttaaatcctgttttcccatcggcttat
caagtaccatacaaatgttcttattgtgaacaaagtgaatcacaaactgcaaccattaga
ggaagttttgatcaagtagtaaaacaaagtcaattaaatccatccgttgtaattaaaagc
ccaagtagaaataattacccaaatgccccaatttatgaccaacaagaatttggaagaaag
ataaaagttgtaagaaggaaaactaaagatgaataa
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